diff --git a/Cargo.lock b/Cargo.lock
index 463a50ce9..31a666ea9 100644
--- a/Cargo.lock
+++ b/Cargo.lock
@@ -1461,7 +1461,7 @@ dependencies = [
 
 [[package]]
 name = "nextclade"
-version = "2.0.0-beta.3"
+version = "2.0.0-beta.4"
 dependencies = [
  "assert2",
  "atty",
@@ -1511,7 +1511,7 @@ dependencies = [
 
 [[package]]
 name = "nextclade-cli"
-version = "2.0.0-beta.3"
+version = "2.0.0-beta.4"
 dependencies = [
  "assert2",
  "clap 3.1.18",
@@ -1551,7 +1551,7 @@ dependencies = [
 
 [[package]]
 name = "nextclade-web"
-version = "2.0.0-beta.3"
+version = "2.0.0-beta.4"
 dependencies = [
  "assert2",
  "console_error_panic_hook",
diff --git a/packages_rs/nextclade-cli/Cargo.toml b/packages_rs/nextclade-cli/Cargo.toml
index 4ce7c74cb..80269b2a3 100644
--- a/packages_rs/nextclade-cli/Cargo.toml
+++ b/packages_rs/nextclade-cli/Cargo.toml
@@ -1,7 +1,7 @@
 [package]
 name = "nextclade-cli"
 description = "Alignment, mutation calling, phylogenetic placement, clade assignment and quality control checks for viral genetic sequences. CLI module."
-version = "2.0.0-beta.3"
+version = "2.0.0-beta.4"
 repository = "https://github.com/nextstrain/nextclade"
 documentation = "https://docs.nextstrain.org/projects/nextclade/en/stable/"
 homepage = "https://clades.nextstrain.org/"
diff --git a/packages_rs/nextclade-web/Cargo.toml b/packages_rs/nextclade-web/Cargo.toml
index a2d14e7a9..e67a21f2d 100644
--- a/packages_rs/nextclade-web/Cargo.toml
+++ b/packages_rs/nextclade-web/Cargo.toml
@@ -1,7 +1,7 @@
 [package]
 name = "nextclade-web"
 description = "Alignment, mutation calling, phylogenetic placement, clade assignment and quality control checks for viral genetic sequences. WebAssembly module."
-version = "2.0.0-beta.3"
+version = "2.0.0-beta.4"
 edition = "2021"
 license = "MIT"
 publish = false
diff --git a/packages_rs/nextclade/Cargo.toml b/packages_rs/nextclade/Cargo.toml
index cf62d43c6..179ac6306 100644
--- a/packages_rs/nextclade/Cargo.toml
+++ b/packages_rs/nextclade/Cargo.toml
@@ -1,7 +1,7 @@
 [package]
 name = "nextclade"
 description = "Alignment, mutation calling, phylogenetic placement, clade assignment and quality control checks for viral genetic sequences. Library module."
-version = "2.0.0-beta.3"
+version = "2.0.0-beta.4"
 repository = "https://github.com/nextstrain/nextclade"
 documentation = "https://docs.nextstrain.org/projects/nextclade/en/stable/"
 homepage = "https://clades.nextstrain.org/"