diff --git a/docs/user/input-files.md b/docs/user/input-files.md index 742ecbd78..0d4ccad34 100644 --- a/docs/user/input-files.md +++ b/docs/user/input-files.md @@ -16,7 +16,7 @@ Accepted formats: [FASTA](https://en.wikipedia.org/wiki/FASTA_format) Viral nucleotide sequence which serves as a reference for alignment and the analysis. Mutations are called relative to the reference sequence. It is expected to be the root of the [reference tree](#reference-tree). The best results are obtained when the reference sequence is a well-known consensus genome, of a very high quality, preferably complete and unambiguous (spans entire genome and has no ambiguous nucleotides). -Accepted formats: [FASTA](https://en.wikipedia.org/wiki/FASTA_format) or plain text. The file is expected to contain only 1 sequence. +Accepted formats: [FASTA](https://en.wikipedia.org/wiki/FASTA_format) file containing exactly 1 sequence. Nextclade Web (advanced mode): accepted in "Root sequence" drag & drop box. A remote URL is also accepted in `input-root-sequence` URL parameter.