From c7dfca118ced67d3f455ac085395830668fe6901 Mon Sep 17 00:00:00 2001 From: Cornelius Roemer Date: Wed, 7 Dec 2022 20:26:13 +0100 Subject: [PATCH] Increase memory of genbank actions to 64 GiB Some already used 64GiB, some were still at 30GiB This should hopefully address OOM errors we got recently --- .github/workflows/fetch-and-ingest-genbank-branch.yml | 2 +- .github/workflows/fetch-and-ingest-genbank-master.yml | 2 +- .github/workflows/ingest-genbank-master.yml | 2 +- 3 files changed, 3 insertions(+), 3 deletions(-) diff --git a/.github/workflows/fetch-and-ingest-genbank-branch.yml b/.github/workflows/fetch-and-ingest-genbank-branch.yml index a76d62fd..c9fee774 100644 --- a/.github/workflows/fetch-and-ingest-genbank-branch.yml +++ b/.github/workflows/fetch-and-ingest-genbank-branch.yml @@ -30,7 +30,7 @@ jobs: --no-download \ --image nextstrain/ncov-ingest \ --cpus 16 \ - --memory 30GiB \ + --memory 64GiB \ --exec env \ . \ envdir env.d snakemake \ diff --git a/.github/workflows/fetch-and-ingest-genbank-master.yml b/.github/workflows/fetch-and-ingest-genbank-master.yml index 3ea32b98..76d2f9dd 100644 --- a/.github/workflows/fetch-and-ingest-genbank-master.yml +++ b/.github/workflows/fetch-and-ingest-genbank-master.yml @@ -65,7 +65,7 @@ jobs: --no-download \ --image nextstrain/ncov-ingest \ --cpus 16 \ - --memory 30GiB \ + --memory 64GiB \ --exec env \ . \ envdir env.d snakemake \ diff --git a/.github/workflows/ingest-genbank-master.yml b/.github/workflows/ingest-genbank-master.yml index 28239b7c..fe0f6d04 100644 --- a/.github/workflows/ingest-genbank-master.yml +++ b/.github/workflows/ingest-genbank-master.yml @@ -36,7 +36,7 @@ jobs: --no-download \ --image nextstrain/ncov-ingest \ --cpus 16 \ - --memory 30GiB \ + --memory 64GiB \ --exec env \ . \ envdir env.d snakemake \