From 725249fb7b3494cc812b6a7eddcdc7602117dd6d Mon Sep 17 00:00:00 2001 From: Jennifer Chang Date: Tue, 21 May 2024 07:49:48 -0700 Subject: [PATCH] fixup: update the links of FASTA and metadata in the README Updates the links of the FASTA and metadata in the phylogenetic README. This probably should have been part of the previous PR: https://github.com/nextstrain/dengue/pull/40 --- phylogenetic/README.md | 20 ++++++++++---------- 1 file changed, 10 insertions(+), 10 deletions(-) diff --git a/phylogenetic/README.md b/phylogenetic/README.md index d3942d66..bfcd74be 100644 --- a/phylogenetic/README.md +++ b/phylogenetic/README.md @@ -37,16 +37,16 @@ There is little redirection and each rule should be able to be reasoned with on This build starts by pulling preprocessed sequence and metadata files from: -* https://data.nextstrain.org/files/dengue/sequences_all.fasta.zst -* https://data.nextstrain.org/files/dengue/metadata_all.tsv.zst -* https://data.nextstrain.org/files/dengue/sequences_denv1.fasta.zst -* https://data.nextstrain.org/files/dengue/metadata_denv1.tsv.zst -* https://data.nextstrain.org/files/dengue/sequences_denv2.fasta.zst -* https://data.nextstrain.org/files/dengue/metadata_denv2.tsv.zst -* https://data.nextstrain.org/files/dengue/sequences_denv3.fasta.zst -* https://data.nextstrain.org/files/dengue/metadata_denv3.tsv.zst -* https://data.nextstrain.org/files/dengue/sequences_denv4.fasta.zst -* https://data.nextstrain.org/files/dengue/metadata_denv4.tsv.zst +* https://data.nextstrain.org/files/workflows/dengue/sequences_all.fasta.zst +* https://data.nextstrain.org/files/workflows/dengue/metadata_all.tsv.zst +* https://data.nextstrain.org/files/workflows/dengue/sequences_denv1.fasta.zst +* https://data.nextstrain.org/files/workflows/dengue/metadata_denv1.tsv.zst +* https://data.nextstrain.org/files/workflows/dengue/sequences_denv2.fasta.zst +* https://data.nextstrain.org/files/workflows/dengue/metadata_denv2.tsv.zst +* https://data.nextstrain.org/files/workflows/dengue/sequences_denv3.fasta.zst +* https://data.nextstrain.org/files/workflows/dengue/metadata_denv3.tsv.zst +* https://data.nextstrain.org/files/workflows/dengue/sequences_denv4.fasta.zst +* https://data.nextstrain.org/files/workflows/dengue/metadata_denv4.tsv.zst The above datasets have been preprocessed and cleaned from GenBank and are updated at regular intervals.