diff --git a/docs/ubuntu_install.md b/docs/ubuntu_install.md index bebb241d..1de338f1 100644 --- a/docs/ubuntu_install.md +++ b/docs/ubuntu_install.md @@ -88,9 +88,9 @@ export PATH="/usr/local/funannotate:/usr/local/GAG:/usr/local/gmes_petap:/usr/lo #add environmental variables export AUGUSTUS_CONFIG_PATH=/opt/augustus-3.2.1/config -export EVM_HOME=/usr/local/EVidenceModeler +export EVM_HOME=$HOME/.linuxbrew/Cellar/evidencemodeler/1.1.2 export GENEMARK_PATH=/usr/local/gmes_petap -export BAMTOOLS_PATH=/usr/bin +export BAMTOOLS_PATH=$HOME/.linuxbrew/Cellar/bamtools/2.4.0/bin ``` 9) Re-launch a terminal window (or type `source ~/.bash_aliases`). Finally run funannotate setup script to download databases and identify any problems.