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[[6, "getaring"]], "initRandomMatrix": [[6, "initrandommatrix"]], "listplace": [[6, "listplace"]], "nllf": [[6, "nllf"]], "nllf2": [[6, "nllf2"]], "noiseData": [[6, "noisedata"]], "npG2SVAR": [[6, "npg2svar"]], "presence_probs": [[6, "presence-probs"]], "randomSVAR": [[6, "randomsvar"]], "randomSVARs": [[6, "randomsvars"]], "randweights": [[6, "randweights"]], "sampleWeights": [[6, "sampleweights"]], "scoreAGraph": [[6, "scoreagraph"]], "stableVAR": [[6, "stablevar"]], "symchol": [[6, "symchol"]], "transitionMatrix": [[6, "transitionmatrix"]], "transitionMatrix2": [[6, "transitionmatrix2"]], "transitionMatrix3": [[6, "transitionmatrix3"]], "transitionMatrix4": [[6, "transitionmatrix4"]], "weight_and_mask": [[6, "weight-and-mask"]], "x2M": [[6, "x2m"]], "pc": [[7, "pc"]], "dpc": [[7, "dpc"]], "fdr": [[7, "fdr"]], "fdrCutoff": [[7, "fdrcutoff"]], "fdrQ": [[7, "fdrq"]], "independent": [[7, "independent"]], "independent_": [[7, "id1"]], "kernel": [[7, "kernel"]], "moment22": [[7, "moment22"]], "np_fisherZ": [[7, "np-fisherz"]], "residuals_": [[7, "residuals"]], "Getting Started": [[8, "getting-started"]], "Contributors": [[9, "contributors"]], "Sergey Plis": [[9, "sergey-plis"]], "Sajad Abavisani": [[9, "sajad-abavisani"]], "Ian Beaver": [[9, "ian-beaver"]], "Girish Mittapalle": [[9, "girish-mittapalle"]], "Installation": [[10, "installation"]], "gunfolds installation": [[10, "gunfolds-installation"]], "clingo installation": [[10, "clingo-installation"]], "graph-tool installation": [[10, "graph-tool-installation"]], "PyGObject installation": [[10, "pygobject-installation"]], "Publications": [[11, "publications"]], "Tutorials": [[12, "tutorials"]], "Graph Format": [[12, "graph-format"]], "graphkit Usage": [[12, "graphkit-usage"]], "How to create a ring graph with some added edges?": [[12, "how-to-create-a-ring-graph-with-some-added-edges"]], "How to create a random graph?": [[12, "how-to-create-a-random-graph"]], "How to create a DAG connecting multiple scc rings?": [[12, "how-to-create-a-dag-connecting-multiple-scc-rings"]], "gtool Usage": [[12, "gtool-usage"]], "How to use gtool to plot graphs?": [[12, "how-to-use-gtool-to-plot-graphs"]], "bfutils Usage": [[12, "bfutils-usage"]], "How to to undersample a graph by one?": [[12, "how-to-to-undersample-a-graph-by-one"]], "How to get all undersamplings of a given graph g?": [[12, "how-to-get-all-undersamplings-of-a-given-graph-g"]], "How to run a rasl algorithm?": [[12, "how-to-run-a-rasl-algorithm"]], "Welcome to Gunfold\u2019s documentation!": [[13, "welcome-to-gunfold-s-documentation"]], "Contents:": [[13, null]], "Indices and tables": [[13, "indices-and-tables"]], "gunfolds": [[14, "gunfolds"]], "solvers": [[15, "solvers"]], "declarative": [[16, "declarative"]], "clingo_msl": [[17, "clingo-msl"]], "g2clingo_msl": [[17, "g2clingo-msl"]], "msl": [[17, "msl"]], "msl_command": [[17, "msl-command"]], "rasl_msl": [[17, "rasl-msl"]], "clingo_rasl": [[18, "clingo-rasl"]], "drasl": [[18, "drasl"]], "drasl_command": [[18, "drasl-command"]], "drate": [[18, "drate"]], "glist2str": [[18, "glist2str"]], "rasl": [[18, "rasl"]], "rasl_command": [[18, "rasl-command"]], "weighted_drasl_program": [[18, "weighted-drasl-program"]], "imperative": [[19, "imperative"]], "traversal": [[20, "traversal"]], "add2edges": [[20, "add2edges"]], "addaAedge": [[20, "addaaedge"]], "addaVpath": [[20, "addavpath"]], "addacedge": [[20, "addacedge"]], "addanedge": [[20, "addanedge"], [28, "addanedge"]], "addapath": [[20, "addapath"]], "addavedge": [[20, "addavedge"]], "check3": [[20, "check3"]], "checkAedge": [[20, "checkaedge"]], "checkApath": [[20, "checkapath"]], "checkable": [[20, "checkable"]], "checkbedges": [[20, "checkbedges"]], "checkcedge": [[20, "checkcedge"]], "checkedge": [[20, "checkedge"]], "checker": [[20, "checker"]], "checkerDS": [[20, "checkerds"]], "checkvedge": [[20, "checkvedge"]], "childrenedges": [[20, "childrenedges"]], "chunks": [[20, "chunks"]], "cleanVedges": [[20, 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"length-d-paths"]], "longpaths_pick": [[20, "longpaths-pick"]], "make_allforks_and_rest": [[20, "make-allforks-and-rest"]], "make_emptyforks": [[20, "make-emptyforks"]], "make_fullforks": [[20, "make-fullforks"]], "make_longpaths": [[20, "make-longpaths"]], "makechains": [[20, "makechains"]], "makesink": [[20, "makesink"]], "makesinks": [[20, "makesinks"]], "mask2edges": [[20, "mask2edges"]], "maskaAedge": [[20, "maskaaedge"]], "maskaCedge": [[20, "maskacedge"]], "maskaVpath": [[20, "maskavpath"]], "maskanedge": [[20, "maskanedge"]], "maskapath": [[20, "maskapath"]], "maskavedge": [[20, "maskavedge"]], "memo_no_return": [[20, "memo-no-return"]], "ok2add2edges": [[20, "ok2add2edges"]], "ok2addaAedge": [[20, "ok2addaaedge"]], "ok2addaVpath": [[20, "ok2addavpath"]], "ok2addacedge": [[20, "ok2addacedge"]], "ok2addanedge": [[20, "ok2addanedge"]], "ok2addanedge1": [[20, "ok2addanedge1"]], "ok2addanedge2": [[20, "ok2addanedge2"]], "ok2addapath": [[20, "ok2addapath"]], "ok2addavedge": [[20, 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gunfolds.solvers.clingo_msl)": [[17, "gunfolds.solvers.clingo_msl.g2clingo_msl"]], "msl() (in module gunfolds.solvers.clingo_msl)": [[17, "gunfolds.solvers.clingo_msl.msl"]], "msl_command() (in module gunfolds.solvers.clingo_msl)": [[17, "gunfolds.solvers.clingo_msl.msl_command"]], "rasl_msl() (in module gunfolds.solvers.clingo_msl)": [[17, "gunfolds.solvers.clingo_msl.rasl_msl"]], "rate() (in module gunfolds.solvers.clingo_msl)": [[17, "gunfolds.solvers.clingo_msl.rate"]], "drasl() (in module gunfolds.solvers.clingo_rasl)": [[18, "gunfolds.solvers.clingo_rasl.drasl"]], "drasl_command() (in module gunfolds.solvers.clingo_rasl)": [[18, "gunfolds.solvers.clingo_rasl.drasl_command"]], "drate() (in module gunfolds.solvers.clingo_rasl)": [[18, "gunfolds.solvers.clingo_rasl.drate"]], "glist2str() (in module gunfolds.solvers.clingo_rasl)": [[18, "gunfolds.solvers.clingo_rasl.glist2str"]], "rasl() (in module gunfolds.solvers.clingo_rasl)": [[18, "gunfolds.solvers.clingo_rasl.rasl"]], 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"checkvedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.checkvedge"]], "childrenedges() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.childrenedges"]], "chunks() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.chunks"]], "cleanvedges() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.cleanVedges"]], "cleanedges() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.cleanedges"]], "cloneempty() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.cloneempty"]], "conformanceds() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.conformanceDS"]], "del2edges() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.del2edges"]], "del_empty() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.del_empty"]], "delaaedge() (in module gunfolds.solvers.traversal)": [[20, 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gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.gpurgepath"]], "gsig() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.gsig"]], "inorder_check2() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.inorder_check2"]], "inorder_checks() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.inorder_checks"]], "invertcdselement() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.invertCDSelement"]], "isaedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.isAedge"]], "isapath() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.isApath"]], "iscedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.isCedge"]], "isedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.isedge"]], "isvedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.isvedge"]], "length_d_loopy_paths() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.length_d_loopy_paths"]], "length_d_paths() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.length_d_paths"]], "longpaths_pick() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.longpaths_pick"]], "make_allforks_and_rest() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.make_allforks_and_rest"]], "make_emptyforks() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.make_emptyforks"]], "make_fullforks() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.make_fullforks"]], "make_longpaths() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.make_longpaths"]], "makechains() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.makechains"]], "makesink() (in module gunfolds.solvers.traversal)": [[20, 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module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.ok2add2edges"]], "ok2addaaedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.ok2addaAedge"]], "ok2addavpath() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.ok2addaVpath"]], "ok2addacedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.ok2addacedge"]], "ok2addanedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.ok2addanedge"]], "ok2addanedge1() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.ok2addanedge1"]], "ok2addanedge2() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.ok2addanedge2"]], "ok2addapath() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.ok2addapath"]], "ok2addavedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.ok2addavedge"]], "prune_sort_cds() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.prune_sort_CDS"]], "prunepaths_1d() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.prunepaths_1D"]], "purgepath() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.purgepath"]], "selfloops() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.selfloops"]], "signature() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.signature"]], "single_nodes() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.single_nodes"]], "supergraphs_in_eq() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.supergraphs_in_eq"]], "threedges_pick() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.threedges_pick"]], "try_till_d_path() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.try_till_d_path"]], "try_till_path() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.try_till_path"]], "twoedges_pick() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.twoedges_pick"]], "v2g22g1() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.v2g22g1"]], "vedgelist() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.vedgelist"]], "add2set_() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.add2set_"]], "add2set_loop() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.add2set_loop"]], "allsloops() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.allsloops"]], "bconflictor() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.bconflictor"]], "build_loop_step() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.build_loop_step"]], "cacheconflicts() (in module 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"gunfolds.viz.gtool.colorcomponents"]], "every_edge_control_points() (in module gunfolds.viz.gtool)": [[35, "gunfolds.viz.gtool.every_edge_control_points"]], "g2gt() (in module gunfolds.viz.gtool)": [[35, "gunfolds.viz.gtool.g2gt"]], "getscreensize() (in module gunfolds.viz.gtool)": [[35, "gunfolds.viz.gtool.getscreensize"]], "gt2g() (in module gunfolds.viz.gtool)": [[35, "gunfolds.viz.gtool.gt2g"]], "hshift() (in module gunfolds.viz.gtool)": [[35, "gunfolds.viz.gtool.hshift"]], "linegraph() (in module gunfolds.viz.gtool)": [[35, "gunfolds.viz.gtool.linegraph"]], "plotg() (in module gunfolds.viz.gtool)": [[35, "gunfolds.viz.gtool.plotg"]], "plotgunfolds() (in module gunfolds.viz.gtool)": [[35, "gunfolds.viz.gtool.plotgunfolds"]]}}) \ No newline at end of file +Search.setIndex({"docnames": ["conversions", "conversions/clingo", "conversions/external", "conversions/internal", "estimation", "estimation/grangercausality", "estimation/linear_model", "estimation/pc", "getting_started", 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"solvers/declarative.rst", "solvers/declarative/clingo_msl.rst", "solvers/declarative/clingo_rasl.rst", "solvers/imperative.rst", "solvers/imperative/traversal.rst", "solvers/imperative/unknownrate.rst", "utils.rst", "utils/bfutils.rst", "utils/calc_procs.rst", "utils/clingo.rst", "utils/comparison.rst", "utils/ecj.rst", "utils/graphkit.rst", "utils/myTimeout.rst", "utils/neighborhoods.rst", "utils/simpleloops.rst", "utils/zickle.rst", "viz.rst", "viz/dbn2latex.rst", "viz/gtool.rst"], "titles": ["conversions", "clingo", "external", "internal", "estimation", "grangercausality", "linear_model", "pc", "Getting Started", "Contributors", "Installation", "Publications", "Tutorials", "Welcome to Gunfold\u2019s documentation!", "gunfolds", "solvers", "declarative", "clingo_msl", "clingo_rasl", "imperative", "traversal", "unknownrate", "utils", "bfutils", "calc_procs", "clingo", "comparison", "ecj", "graphkit", "myTimeout", "neighborhoods", "simpleloops", "zickle", "viz", "dbn2latex", "gtool"], 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"edgepairs2g"]], "g2ian": [[3, "g2ian"]], "g2num": [[3, "g2num"]], "g2vec": [[3, "g2vec"]], "graph2adj": [[3, "graph2adj"]], "graph2badj": [[3, "graph2badj"]], "ian2g": [[3, "ian2g"]], "nodenum": [[3, "nodenum"]], "num2CG": [[3, "num2cg"]], "ug2num": [[3, "ug2num"]], "vec2adj": [[3, "vec2adj"]], "vec2g": [[3, "vec2g"]], "estimation": [[4, "estimation"]], "grangercausality": [[5, "grangercausality"]], "gc": [[5, "gc"]], "linear_model": [[6, "linear-model"]], "AB2intAB": [[6, "ab2intab"]], "G2AH": [[6, "g2ah"]], "G2SVAR": [[6, "g2svar"]], "VARbic": [[6, "varbic"]], "amap": [[6, "amap"]], "bnf2CG": [[6, "bnf2cg"]], "data2AB": [[6, "data2ab"]], "data2VARgraph": [[6, "data2vargraph"]], "data2graph": [[6, "data2graph"]], "decide_absences": [[6, "decide-absences"]], "drawsamplesLG": [[6, "drawsampleslg"]], "drawsamplesMA": [[6, "drawsamplesma"]], "estimateG": [[6, "estimateg"]], "estimateSVAR": [[6, "estimatesvar"]], "genData": [[6, "gendata"]], "getAgraph": [[6, "getagraph"]], "getAring": [[6, "getaring"]], "initRandomMatrix": [[6, "initrandommatrix"]], "listplace": [[6, "listplace"]], "nllf": [[6, "nllf"]], "nllf2": [[6, "nllf2"]], "noiseData": [[6, "noisedata"]], "npG2SVAR": [[6, "npg2svar"]], "presence_probs": [[6, "presence-probs"]], "randomSVAR": [[6, "randomsvar"]], "randomSVARs": [[6, "randomsvars"]], "randweights": [[6, "randweights"]], "sampleWeights": [[6, "sampleweights"]], "scoreAGraph": [[6, "scoreagraph"]], "stableVAR": [[6, "stablevar"]], "symchol": [[6, "symchol"]], "transitionMatrix": [[6, "transitionmatrix"]], "transitionMatrix2": [[6, "transitionmatrix2"]], "transitionMatrix3": [[6, "transitionmatrix3"]], "transitionMatrix4": [[6, "transitionmatrix4"]], "weight_and_mask": [[6, "weight-and-mask"]], "x2M": [[6, "x2m"]], "pc": [[7, "pc"]], "dpc": [[7, "dpc"]], "fdr": [[7, "fdr"]], "fdrCutoff": [[7, "fdrcutoff"]], "fdrQ": [[7, "fdrq"]], "independent": [[7, "independent"]], "independent_": [[7, "id1"]], "kernel": [[7, "kernel"]], "moment22": [[7, "moment22"]], "np_fisherZ": [[7, "np-fisherz"]], "residuals_": [[7, "residuals"]], "Getting Started": [[8, "getting-started"]], "Contributors": [[9, "contributors"]], "Sergey Plis": [[9, "sergey-plis"]], "Sajad Abavisani": [[9, "sajad-abavisani"]], "Ian Beaver": [[9, "ian-beaver"]], "Girish Mittapalle": [[9, "girish-mittapalle"]], "Installation": [[10, "installation"]], "gunfolds installation": [[10, "gunfolds-installation"]], "clingo installation": [[10, "clingo-installation"]], "graph-tool installation": [[10, "graph-tool-installation"]], "PyGObject installation": [[10, "pygobject-installation"]], "Publications": [[11, "publications"]], "Tutorials": [[12, "tutorials"]], "Graph Format": [[12, "graph-format"]], "graphkit Usage": [[12, "graphkit-usage"]], "How to create a ring graph with some added edges?": [[12, "how-to-create-a-ring-graph-with-some-added-edges"]], "How to create a random graph?": [[12, "how-to-create-a-random-graph"]], "How to create a DAG connecting multiple scc rings?": [[12, "how-to-create-a-dag-connecting-multiple-scc-rings"]], "gtool Usage": [[12, "gtool-usage"]], "How to use gtool to plot graphs?": [[12, "how-to-use-gtool-to-plot-graphs"]], "bfutils Usage": [[12, "bfutils-usage"]], "How to to undersample a graph by one?": [[12, "how-to-to-undersample-a-graph-by-one"]], "How to get all undersamplings of a given graph g?": [[12, "how-to-get-all-undersamplings-of-a-given-graph-g"]], "How to run a rasl algorithm?": [[12, "how-to-run-a-rasl-algorithm"]], "Welcome to Gunfold\u2019s documentation!": [[13, "welcome-to-gunfold-s-documentation"]], "Contents:": [[13, null]], "Indices and tables": [[13, "indices-and-tables"]], "gunfolds": [[14, "gunfolds"]], "solvers": [[15, "solvers"]], "declarative": [[16, "declarative"]], "clingo_msl": [[17, "clingo-msl"]], "g2clingo_msl": [[17, "g2clingo-msl"]], "msl": [[17, "msl"]], "msl_command": [[17, "msl-command"]], "rasl_msl": [[17, "rasl-msl"]], "clingo_rasl": [[18, "clingo-rasl"]], "drasl": [[18, "drasl"]], "drasl_command": [[18, "drasl-command"]], "drate": [[18, "drate"]], "glist2str": [[18, "glist2str"]], "rasl": [[18, "rasl"]], "rasl_command": [[18, "rasl-command"]], "weighted_drasl_program": [[18, "weighted-drasl-program"]], "imperative": [[19, "imperative"]], "traversal": [[20, "traversal"]], "add2edges": [[20, "add2edges"]], "addaAedge": [[20, "addaaedge"]], "addaVpath": [[20, "addavpath"]], "addacedge": [[20, "addacedge"]], "addanedge": [[20, "addanedge"], [28, "addanedge"]], "addapath": [[20, "addapath"]], "addavedge": [[20, "addavedge"]], "check3": [[20, "check3"]], "checkAedge": [[20, "checkaedge"]], "checkApath": [[20, "checkapath"]], "checkable": [[20, "checkable"]], "checkbedges": [[20, "checkbedges"]], "checkcedge": [[20, "checkcedge"]], "checkedge": [[20, "checkedge"]], "checker": [[20, "checker"]], "checkerDS": [[20, "checkerds"]], "checkvedge": [[20, "checkvedge"]], "childrenedges": [[20, "childrenedges"]], "chunks": [[20, "chunks"]], "cleanVedges": [[20, "cleanvedges"]], "cleanedges": [[20, "cleanedges"]], "cloneempty": [[20, "cloneempty"]], "conformanceDS": [[20, "conformanceds"]], "del2edges": [[20, "del2edges"]], "del_empty": [[20, "del-empty"]], "delaAedge": [[20, "delaaedge"]], "delaVpath": [[20, "delavpath"]], "delacedge": [[20, "delacedge"]], "delanedge": [[20, "delanedge"], [28, "delanedge"]], "delapath": [[20, "delapath"]], "delavedge": [[20, "delavedge"]], "edge_function_idx": [[20, "edge-function-idx"]], "edge_increment_ok": [[20, "edge-increment-ok"]], "esig": [[20, "esig"]], "forks": [[20, "forks"]], "gpurgepath": [[20, "gpurgepath"]], "gsig": [[20, "gsig"]], "inorder_check2": [[20, "inorder-check2"]], "inorder_checks": [[20, "inorder-checks"]], "invertCDSelement": [[20, "invertcdselement"]], "isAedge": [[20, "isaedge"]], "isApath": [[20, "isapath"]], "isCedge": [[20, "iscedge"]], "isedge": [[20, "isedge"]], "isvedge": [[20, "isvedge"]], "length_d_loopy_paths": [[20, "length-d-loopy-paths"]], "length_d_paths": [[20, "length-d-paths"]], "longpaths_pick": [[20, "longpaths-pick"]], "make_allforks_and_rest": [[20, "make-allforks-and-rest"]], "make_emptyforks": [[20, "make-emptyforks"]], "make_fullforks": [[20, "make-fullforks"]], "make_longpaths": [[20, "make-longpaths"]], "makechains": [[20, "makechains"]], "makesink": [[20, "makesink"]], "makesinks": [[20, "makesinks"]], "mask2edges": [[20, "mask2edges"]], "maskaAedge": [[20, "maskaaedge"]], "maskaCedge": [[20, "maskacedge"]], "maskaVpath": [[20, "maskavpath"]], "maskanedge": [[20, "maskanedge"]], "maskapath": [[20, "maskapath"]], "maskavedge": [[20, "maskavedge"]], "memo_no_return": [[20, "memo-no-return"]], "ok2add2edges": [[20, "ok2add2edges"]], "ok2addaAedge": [[20, "ok2addaaedge"]], "ok2addaVpath": [[20, "ok2addavpath"]], "ok2addacedge": [[20, "ok2addacedge"]], "ok2addanedge": [[20, "ok2addanedge"]], "ok2addanedge1": [[20, "ok2addanedge1"]], "ok2addanedge2": [[20, "ok2addanedge2"]], "ok2addapath": [[20, "ok2addapath"]], "ok2addavedge": [[20, 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[[21, "del-loop"]], "e2num": [[21, "e2num"]], "ekey2e": [[21, "ekey2e"]], "forward_loop_match": [[21, "forward-loop-match"]], "gen_loops": [[21, "gen-loops"]], "iteqclass": [[21, "iteqclass"]], "lconflictors": [[21, "lconflictors"]], "lconfpairs": [[21, "lconfpairs"]], "le2num": [[21, "le2num"]], "liteqclass": [[21, "liteqclass"]], "loop2graph": [[21, "loop2graph"]], "main": [[21, "main"]], "matchAloop": [[21, "matchaloop"]], "perm_circular": [[21, "perm-circular"]], "prune_conflicts": [[21, "prune-conflicts"]], "prune_loops": [[21, "prune-loops"]], "reverse": [[21, "reverse"]], "reverse_edge_match": [[21, "reverse-edge-match"]], "reverse_loop_match": [[21, "reverse-loop-match"]], "skip_conflict": [[21, "skip-conflict"]], "skip_conflictors": [[21, "skip-conflictors"]], "start_progress_bar": [[21, "start-progress-bar"]], "utils": [[22, "utils"]], "bfutils": [[23, "bfutils"]], "all_undersamples": [[23, "all-undersamples"]], "bidirected_inc": [[23, "bidirected-inc"]], "call_u_conflicts": 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gunfolds.conversions)": [[1, "gunfolds.conversions.g2wclingo"]], "msl_jclingo2g() (in module gunfolds.conversions)": [[1, "gunfolds.conversions.msl_jclingo2g"]], "numbered_g2clingo() (in module gunfolds.conversions)": [[1, "gunfolds.conversions.numbered_g2clingo"]], "numbered_g2wclingo() (in module gunfolds.conversions)": [[1, "gunfolds.conversions.numbered_g2wclingo"]], "old_g2clingo() (in module gunfolds.conversions)": [[1, "gunfolds.conversions.old_g2clingo"]], "rasl_a2edgetuple() (in module gunfolds.conversions)": [[1, "gunfolds.conversions.rasl_a2edgetuple"]], "rasl_c2edgepairs() (in module gunfolds.conversions)": [[1, "gunfolds.conversions.rasl_c2edgepairs"]], "rasl_jclingo2g() (in module gunfolds.conversions)": [[1, "gunfolds.conversions.rasl_jclingo2g"]], "rate() (in module gunfolds.conversions)": [[1, "gunfolds.conversions.rate"]], "g2ig() (in module gunfolds.conversions)": [[2, "gunfolds.conversions.g2ig"]], "graph2dot() (in module gunfolds.conversions)": [[2, "gunfolds.conversions.graph2dot"]], "graph2nx() (in module gunfolds.conversions)": [[2, "gunfolds.conversions.graph2nx"]], "nx2graph() (in module gunfolds.conversions)": [[2, "gunfolds.conversions.nx2graph"]], "adjs2graph() (in module gunfolds.conversions)": [[3, "gunfolds.conversions.adjs2graph"]], "bg2num() (in module gunfolds.conversions)": [[3, "gunfolds.conversions.bg2num"]], "dict_format_converter() (in module gunfolds.conversions)": [[3, "gunfolds.conversions.dict_format_converter"]], "edgepairs2g() (in module gunfolds.conversions)": [[3, "gunfolds.conversions.edgepairs2g"]], "g2ian() (in module gunfolds.conversions)": [[3, "gunfolds.conversions.g2ian"]], "g2num() (in module gunfolds.conversions)": [[3, "gunfolds.conversions.g2num"]], "g2vec() (in module gunfolds.conversions)": [[3, "gunfolds.conversions.g2vec"]], "graph2adj() (in module gunfolds.conversions)": [[3, "gunfolds.conversions.graph2adj"]], "graph2badj() (in module gunfolds.conversions)": [[3, "gunfolds.conversions.graph2badj"]], "ian2g() (in module gunfolds.conversions)": [[3, "gunfolds.conversions.ian2g"]], "nodenum() (in module gunfolds.conversions)": [[3, "gunfolds.conversions.nodenum"]], "num2cg() (in module gunfolds.conversions)": [[3, "gunfolds.conversions.num2CG"]], "ug2num() (in module gunfolds.conversions)": [[3, "gunfolds.conversions.ug2num"]], "vec2adj() (in module gunfolds.conversions)": [[3, "gunfolds.conversions.vec2adj"]], "vec2g() (in module gunfolds.conversions)": [[3, "gunfolds.conversions.vec2g"]], "gc() (in module gunfolds.estimation.grangercausality)": [[5, "gunfolds.estimation.grangercausality.gc"]], "ab2intab() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.AB2intAB"]], "g2ah() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.G2AH"]], "g2svar() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.G2SVAR"]], "varbic() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.VARbic"]], "amap() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.amap"]], "bnf2cg() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.bnf2CG"]], "data2ab() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.data2AB"]], "data2vargraph() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.data2VARgraph"]], "data2graph() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.data2graph"]], "decide_absences() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.decide_absences"]], "drawsampleslg() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.drawsamplesLG"]], "drawsamplesma() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.drawsamplesMA"]], "estimateg() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.estimateG"]], "estimatesvar() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.estimateSVAR"]], "gendata() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.genData"]], "getagraph() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.getAgraph"]], "getaring() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.getAring"]], "initrandommatrix() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.initRandomMatrix"]], "listplace() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.listplace"]], "nllf() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.nllf"]], "nllf2() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.nllf2"]], "noisedata() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.noiseData"]], "npg2svar() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.npG2SVAR"]], "presence_probs() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.presence_probs"]], "randomsvar() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.randomSVAR"]], "randomsvars() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.randomSVARs"]], "randweights() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.randweights"]], "sampleweights() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.sampleWeights"]], "scoreagraph() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.scoreAGraph"]], "stablevar() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.stableVAR"]], "symchol() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.symchol"]], "transitionmatrix() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.transitionMatrix"]], "transitionmatrix2() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.transitionMatrix2"]], "transitionmatrix3() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.transitionMatrix3"]], "transitionmatrix4() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.transitionMatrix4"]], "weight_and_mask() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.weight_and_mask"]], "x2m() (in module gunfolds.estimation.linear_model)": [[6, "gunfolds.estimation.linear_model.x2M"]], "dpc() (in module gunfolds.estimation.pc)": [[7, "gunfolds.estimation.pc.dpc"]], "fdr() (in module gunfolds.estimation.pc)": [[7, "gunfolds.estimation.pc.fdr"]], "fdrcutoff() (in module gunfolds.estimation.pc)": [[7, "gunfolds.estimation.pc.fdrCutoff"]], "fdrq() (in module gunfolds.estimation.pc)": [[7, "gunfolds.estimation.pc.fdrQ"]], "independent() (in module gunfolds.estimation.pc)": [[7, "gunfolds.estimation.pc.independent"]], "independent_() (in module gunfolds.estimation.pc)": [[7, "gunfolds.estimation.pc.independent_"]], "kernel() (in module gunfolds.estimation.pc)": [[7, "gunfolds.estimation.pc.kernel"]], "moment22() (in module gunfolds.estimation.pc)": [[7, "gunfolds.estimation.pc.moment22"]], "np_fisherz() (in module gunfolds.estimation.pc)": [[7, "gunfolds.estimation.pc.np_fisherZ"]], "residuals_() (in module gunfolds.estimation.pc)": [[7, "gunfolds.estimation.pc.residuals_"]], "g2clingo_msl() (in module gunfolds.solvers.clingo_msl)": [[17, "gunfolds.solvers.clingo_msl.g2clingo_msl"]], "msl() (in module gunfolds.solvers.clingo_msl)": [[17, "gunfolds.solvers.clingo_msl.msl"]], "msl_command() (in module gunfolds.solvers.clingo_msl)": [[17, "gunfolds.solvers.clingo_msl.msl_command"]], "rasl_msl() (in module gunfolds.solvers.clingo_msl)": [[17, "gunfolds.solvers.clingo_msl.rasl_msl"]], "rate() (in module gunfolds.solvers.clingo_msl)": [[17, "gunfolds.solvers.clingo_msl.rate"]], "drasl() (in module gunfolds.solvers.clingo_rasl)": [[18, "gunfolds.solvers.clingo_rasl.drasl"]], "drasl_command() (in module gunfolds.solvers.clingo_rasl)": [[18, "gunfolds.solvers.clingo_rasl.drasl_command"]], "drate() (in module gunfolds.solvers.clingo_rasl)": [[18, "gunfolds.solvers.clingo_rasl.drate"]], "glist2str() (in module gunfolds.solvers.clingo_rasl)": [[18, "gunfolds.solvers.clingo_rasl.glist2str"]], "rasl() (in module gunfolds.solvers.clingo_rasl)": [[18, "gunfolds.solvers.clingo_rasl.rasl"]], "rasl_command() (in module gunfolds.solvers.clingo_rasl)": [[18, "gunfolds.solvers.clingo_rasl.rasl_command"]], "rate() (in module gunfolds.solvers.clingo_rasl)": [[18, "gunfolds.solvers.clingo_rasl.rate"]], "weighted_drasl_program() (in module gunfolds.solvers.clingo_rasl)": [[18, "gunfolds.solvers.clingo_rasl.weighted_drasl_program"]], "add2edges() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.add2edges"]], "addaaedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.addaAedge"]], "addavpath() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.addaVpath"]], "addacedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.addacedge"]], "addanedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.addanedge"]], "addapath() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.addapath"]], "addavedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.addavedge"]], "check3() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.check3"]], "checkaedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.checkAedge"]], "checkapath() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.checkApath"]], "checkable() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.checkable"]], "checkbedges() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.checkbedges"]], "checkcedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.checkcedge"]], "checkedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.checkedge"]], "checker() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.checker"]], "checkerds() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.checkerDS"]], "checkvedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.checkvedge"]], "childrenedges() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.childrenedges"]], "chunks() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.chunks"]], "cleanvedges() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.cleanVedges"]], "cleanedges() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.cleanedges"]], "cloneempty() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.cloneempty"]], "conformanceds() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.conformanceDS"]], "del2edges() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.del2edges"]], "del_empty() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.del_empty"]], "delaaedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.delaAedge"]], "delavpath() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.delaVpath"]], "delacedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.delacedge"]], "delanedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.delanedge"]], "delapath() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.delapath"]], "delavedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.delavedge"]], "edge_function_idx() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.edge_function_idx"]], "edge_increment_ok() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.edge_increment_ok"]], "esig() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.esig"]], "forks() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.forks"]], "gpurgepath() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.gpurgepath"]], "gsig() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.gsig"]], "inorder_check2() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.inorder_check2"]], "inorder_checks() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.inorder_checks"]], "invertcdselement() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.invertCDSelement"]], "isaedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.isAedge"]], "isapath() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.isApath"]], "iscedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.isCedge"]], "isedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.isedge"]], "isvedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.isvedge"]], "length_d_loopy_paths() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.length_d_loopy_paths"]], "length_d_paths() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.length_d_paths"]], "longpaths_pick() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.longpaths_pick"]], "make_allforks_and_rest() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.make_allforks_and_rest"]], "make_emptyforks() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.make_emptyforks"]], "make_fullforks() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.make_fullforks"]], "make_longpaths() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.make_longpaths"]], "makechains() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.makechains"]], "makesink() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.makesink"]], "makesinks() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.makesinks"]], "mask2edges() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.mask2edges"]], "maskaaedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.maskaAedge"]], "maskacedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.maskaCedge"]], "maskavpath() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.maskaVpath"]], "maskanedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.maskanedge"]], "maskapath() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.maskapath"]], "maskavedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.maskavedge"]], "memo_no_return() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.memo_no_return"]], "ok2add2edges() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.ok2add2edges"]], "ok2addaaedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.ok2addaAedge"]], "ok2addavpath() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.ok2addaVpath"]], "ok2addacedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.ok2addacedge"]], "ok2addanedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.ok2addanedge"]], "ok2addanedge1() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.ok2addanedge1"]], "ok2addanedge2() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.ok2addanedge2"]], "ok2addapath() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.ok2addapath"]], "ok2addavedge() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.ok2addavedge"]], "prune_sort_cds() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.prune_sort_CDS"]], "prunepaths_1d() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.prunepaths_1D"]], "purgepath() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.purgepath"]], "selfloops() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.selfloops"]], "signature() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.signature"]], "single_nodes() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.single_nodes"]], "supergraphs_in_eq() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.supergraphs_in_eq"]], "threedges_pick() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.threedges_pick"]], "try_till_d_path() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.try_till_d_path"]], "try_till_path() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.try_till_path"]], "twoedges_pick() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.twoedges_pick"]], "v2g22g1() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.v2g22g1"]], "vedgelist() (in module gunfolds.solvers.traversal)": [[20, "gunfolds.solvers.traversal.vedgelist"]], "add2set_() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.add2set_"]], "add2set_loop() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.add2set_loop"]], "allsloops() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.allsloops"]], "bconflictor() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.bconflictor"]], "build_loop_step() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.build_loop_step"]], "cacheconflicts() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.cacheconflicts"]], "conflictor() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.conflictor"]], "conflictor_set() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.conflictor_set"]], "conflictors() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.conflictors"]], "confpairs() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.confpairs"]], "delaloop() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.delAloop"]], "del_loop() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.del_loop"]], "e2num() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.e2num"]], "ekey2e() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.ekey2e"]], "forward_loop_match() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.forward_loop_match"]], "gen_loops() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.gen_loops"]], "iteqclass() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.iteqclass"]], "lconflictors() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.lconflictors"]], "lconfpairs() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.lconfpairs"]], "le2num() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.le2num"]], "liteqclass() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.liteqclass"]], "loop2graph() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.loop2graph"]], "main() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.main"]], "matchaloop() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.matchAloop"]], "perm_circular() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.perm_circular"]], "prune_conflicts() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.prune_conflicts"]], "prune_loops() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.prune_loops"]], "reverse() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.reverse"]], "reverse_edge_match() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.reverse_edge_match"]], "reverse_loop_match() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.reverse_loop_match"]], "skip_conflict() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.skip_conflict"]], "skip_conflictors() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.skip_conflictors"]], "start_progress_bar() (in module gunfolds.solvers.unknownrate)": [[21, "gunfolds.solvers.unknownrate.start_progress_bar"]], "all_undersamples() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.all_undersamples"]], "bidirected_inc() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.bidirected_inc"]], "call_u_conflicts() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.call_u_conflicts"]], "call_u_conflicts2() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.call_u_conflicts2"]], "call_u_conflicts_d() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.call_u_conflicts_d"]], "call_u_equals() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.call_u_equals"]], "call_u_equals2() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.call_u_equals2"]], "call_undersamples() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.call_undersamples"]], "cc_all() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.cc_all"]], "cc_undersamples() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.cc_undersamples"]], "check_conflict() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.check_conflict"]], "check_conflict_() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.check_conflict_"]], "check_equality() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.check_equality"]], "compact_call_undersamples() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.compact_call_undersamples"]], "compat() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.compat"]], "compatible() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.compatible"]], "dens2edgenum() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.dens2edgenum"]], "dincrement_u() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.dincrement_u"]], "directed_inc() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.directed_inc"]], "edgenum2dens() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.edgenum2dens"]], "forms_loop() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.forms_loop"]], "iall() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.iall"]], "icompat() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.icompat"]], "ilength() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.ilength"]], "increment() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.increment"]], "increment_u() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.increment_u"]], "is_sclique() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.is_sclique"]], "loadgraphs() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.loadgraphs"]], "make_rect() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.make_rect"]], "overshoot() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.overshoot"]], "pure_directed_inc() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.pure_directed_inc"]], "savegraphs() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.savegraphs"]], "undersample() (in module gunfolds.utils.bfutils)": [[23, "gunfolds.utils.bfutils.undersample"]], "get_process_count() (in module gunfolds.utils.calc_procs)": [[24, "gunfolds.utils.calc_procs.get_process_count"]], "clingo() (in module gunfolds.utils.clingo)": [[25, "gunfolds.utils.clingo.clingo"]], "run_clingo() (in module gunfolds.utils.clingo)": [[25, "gunfolds.utils.clingo.run_clingo"]], "sm_converging() (in module gunfolds.utils.comparison)": [[26, "gunfolds.utils.comparison.SM_converging"]], "sm_fixed() (in module gunfolds.utils.comparison)": [[26, "gunfolds.utils.comparison.SM_fixed"]], "compatible_at_u() (in module gunfolds.utils.comparison)": [[26, "gunfolds.utils.comparison.compatible_at_u"]], "gcd4scc() (in module gunfolds.utils.comparison)": [[26, "gunfolds.utils.comparison.gcd4scc"]], "has_root() (in module gunfolds.utils.comparison)": [[26, "gunfolds.utils.comparison.has_root"]], "has_self_loops() (in module gunfolds.utils.comparison)": [[26, "gunfolds.utils.comparison.has_self_loops"]], "has_sink() (in module gunfolds.utils.comparison)": [[26, "gunfolds.utils.comparison.has_sink"]], "randscc() (in module gunfolds.utils.comparison)": [[26, "gunfolds.utils.comparison.randSCC"]], "search_match() (in module gunfolds.utils.comparison)": [[26, "gunfolds.utils.comparison.search_match"]], "clonebfree() (in module gunfolds.utils.ecj)": [[27, "gunfolds.utils.ecj.cloneBfree"]], "dfs_topsort() (in module gunfolds.utils.ecj)": [[27, "gunfolds.utils.ecj.dfs_topsort"]], "gcd() (in module gunfolds.utils.ecj)": [[27, "gunfolds.utils.ecj.gcd"]], "has_unit_cycle() (in module gunfolds.utils.ecj)": [[27, "gunfolds.utils.ecj.has_unit_cycle"]], "listgcd() (in module gunfolds.utils.ecj)": [[27, "gunfolds.utils.ecj.listgcd"]], "listgcd_r() (in module gunfolds.utils.ecj)": [[27, "gunfolds.utils.ecj.listgcd_r"]], "reachable() (in module gunfolds.utils.ecj)": [[27, "gunfolds.utils.ecj.reachable"]], "scc() (in module gunfolds.utils.ecj)": [[27, "gunfolds.utils.ecj.scc"]], "tr() (in module gunfolds.utils.ecj)": [[27, "gunfolds.utils.ecj.tr"]], "walk() (in module gunfolds.utils.ecj)": [[27, "gunfolds.utils.ecj.walk"]], "oce() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.OCE"]], "_oce() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit._OCE"]], "_normed_oce() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit._normed_OCE"]], "_normed_undirected_oce() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit._normed_undirected_OCE"]], "_undirected_oce() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit._undirected_OCE"]], "addaring() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.addAring"]], "addanedge() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.addanedge"]], "addedges() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.addedges"]], "bedgelist() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.bedgelist"]], "bidirected_no_fork() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.bidirected_no_fork"]], "bp_mean_degree_graph() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.bp_mean_degree_graph"]], "bp_pow_degree_graph() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.bp_pow_degree_graph"]], "cerror() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.cerror"]], "clean_leaf_nodes() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.clean_leaf_nodes"]], "complement() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.complement"]], "degree_ring() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.degree_ring"]], "delanedge() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.delanedge"]], "deledges() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.deledges"]], "density() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.density"]], "digonly() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.digonly"]], "edgelist() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.edgelist"]], "ensure_gcd1() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.ensure_gcd1"]], "ensure_graph_gcd1() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.ensure_graph_gcd1"]], "fullyconnected() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.fullyconnected"]], "gcd1_bp_mean_degree_graph() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.gcd1_bp_mean_degree_graph"]], "gcd4scc() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.gcd4scc"]], "gtranspose() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.gtranspose"]], "inbedgelist() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.inbedgelist"]], "inedgelist() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.inedgelist"]], "isdedgesubset() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.isdedgesubset"]], "isedgesubset() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.isedgesubset"]], "mean_degree_graph() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.mean_degree_graph"]], "merge_graphs() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.merge_graphs"]], "merge_list() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.merge_list"]], "no_children() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.no_children"]], "no_parents() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.no_parents"]], "oerror() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.oerror"]], "pow_degree_graph() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.pow_degree_graph"]], "randh() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.randH"]], "randomdag() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.randomDAG"]], "randomtril() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.randomTRIL"]], "remove_loop() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.remove_loop"]], "remove_tril_singletons() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.remove_tril_singletons"]], "ring() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.ring"]], "ring_sccs() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.ring_sccs"]], "ringarcs() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.ringarcs"]], "ringmore() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.ringmore"]], "scale_free() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.scale_free"]], "scc_unreachable() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.scc_unreachable"]], "selfloop() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.selfloop"]], "shift_labels() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.shift_labels"]], "shift_list_labels() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.shift_list_labels"]], "subgraph() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.subgraph"]], "superclique() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.superclique"]], "udensity() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.udensity"]], "undedgelist() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.undedgelist"]], "upairs() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.upairs"]], "update_graph() (in module gunfolds.utils.graphkit)": [[28, "gunfolds.utils.graphkit.update_graph"]], "timeout() (in module gunfolds.utils.mytimeout)": [[29, "gunfolds.utils.myTimeout.timeout"]], "find_nearest_reachable() (in module gunfolds.utils.neighborhoods)": [[30, "gunfolds.utils.neighborhoods.find_nearest_reachable"]], "hamming_neighbors() (in module gunfolds.utils.neighborhoods)": [[30, "gunfolds.utils.neighborhoods.hamming_neighbors"]], "ncr() (in module gunfolds.utils.neighborhoods)": [[30, "gunfolds.utils.neighborhoods.ncr"]], "num_natstep() (in module gunfolds.utils.neighborhoods)": [[30, "gunfolds.utils.neighborhoods.num_nATstep"]], "num_neighbors() (in module gunfolds.utils.neighborhoods)": [[30, "gunfolds.utils.neighborhoods.num_neighbors"]], "print_loops() (in module gunfolds.utils.simpleloops)": [[31, "gunfolds.utils.simpleloops.print_loops"]], "simple_loops() (in module gunfolds.utils.simpleloops)": [[31, "gunfolds.utils.simpleloops.simple_loops"]], "load() (in module gunfolds.utils.zickle)": [[32, "gunfolds.utils.zickle.load"]], "save() (in module gunfolds.utils.zickle)": [[32, "gunfolds.utils.zickle.save"]], "addselfedge() (in module gunfolds.viz.dbn2latex)": [[34, "gunfolds.viz.dbn2latex.addselfedge"]], "cdbn_single() (in module gunfolds.viz.dbn2latex)": [[34, "gunfolds.viz.dbn2latex.cdbn_single"]], "cdbnprint() (in module gunfolds.viz.dbn2latex)": [[34, "gunfolds.viz.dbn2latex.cdbnprint"]], "cdbnsingle() (in module gunfolds.viz.dbn2latex)": [[34, "gunfolds.viz.dbn2latex.cdbnsingle"]], "cdbnwrap() (in module gunfolds.viz.dbn2latex)": [[34, "gunfolds.viz.dbn2latex.cdbnwrap"]], "dbnprint() (in module gunfolds.viz.dbn2latex)": [[34, "gunfolds.viz.dbn2latex.dbnprint"]], "dict2graph() (in module gunfolds.viz.dbn2latex)": [[34, "gunfolds.viz.dbn2latex.dict2graph"]], "emacs_vars() (in module gunfolds.viz.dbn2latex)": [[34, "gunfolds.viz.dbn2latex.emacs_vars"]], "foldplot() (in module gunfolds.viz.dbn2latex)": [[34, "gunfolds.viz.dbn2latex.foldplot"]], "g_single() (in module gunfolds.viz.dbn2latex)": [[34, "gunfolds.viz.dbn2latex.g_single"]], "getangle() (in module gunfolds.viz.dbn2latex)": [[34, "gunfolds.viz.dbn2latex.getangle"]], "gmatrix_fold() (in module gunfolds.viz.dbn2latex)": [[34, "gunfolds.viz.dbn2latex.gmatrix_fold"]], "gmatrix_list() (in module gunfolds.viz.dbn2latex)": [[34, "gunfolds.viz.dbn2latex.gmatrix_list"]], "gprint() (in module gunfolds.viz.dbn2latex)": [[34, "gunfolds.viz.dbn2latex.gprint"]], "graph2dict() (in module gunfolds.viz.dbn2latex)": [[34, "gunfolds.viz.dbn2latex.graph2dict"]], "gsingle() (in module gunfolds.viz.dbn2latex)": [[34, "gunfolds.viz.dbn2latex.gsingle"]], "matrix_edges() (in module gunfolds.viz.dbn2latex)": [[34, "gunfolds.viz.dbn2latex.matrix_edges"]], "matrix_end() (in module gunfolds.viz.dbn2latex)": [[34, "gunfolds.viz.dbn2latex.matrix_end"]], "matrix_fold() (in module gunfolds.viz.dbn2latex)": [[34, "gunfolds.viz.dbn2latex.matrix_fold"]], "matrix_grid() (in module gunfolds.viz.dbn2latex)": [[34, "gunfolds.viz.dbn2latex.matrix_grid"]], "matrix_list() (in module gunfolds.viz.dbn2latex)": [[34, "gunfolds.viz.dbn2latex.matrix_list"]], "matrix_start() (in module gunfolds.viz.dbn2latex)": [[34, "gunfolds.viz.dbn2latex.matrix_start"]], "output_graph_figure() (in module gunfolds.viz.dbn2latex)": [[34, "gunfolds.viz.dbn2latex.output_graph_figure"]], "paintscc() (in module gunfolds.viz.dbn2latex)": [[34, "gunfolds.viz.dbn2latex.paintSCC"]], "unfoldplot() (in module gunfolds.viz.dbn2latex)": [[34, "gunfolds.viz.dbn2latex.unfoldplot"]], "circ_position() (in module gunfolds.viz.gtool)": [[35, "gunfolds.viz.gtool.circ_position"]], "colorcomponents() (in module gunfolds.viz.gtool)": [[35, "gunfolds.viz.gtool.colorcomponents"]], "every_edge_control_points() (in module gunfolds.viz.gtool)": [[35, "gunfolds.viz.gtool.every_edge_control_points"]], "g2gt() (in module gunfolds.viz.gtool)": [[35, "gunfolds.viz.gtool.g2gt"]], "getscreensize() (in module gunfolds.viz.gtool)": [[35, "gunfolds.viz.gtool.getscreensize"]], "gt2g() (in module gunfolds.viz.gtool)": [[35, "gunfolds.viz.gtool.gt2g"]], "hshift() (in module gunfolds.viz.gtool)": [[35, "gunfolds.viz.gtool.hshift"]], "linegraph() (in module gunfolds.viz.gtool)": [[35, "gunfolds.viz.gtool.linegraph"]], "plotg() (in module gunfolds.viz.gtool)": [[35, "gunfolds.viz.gtool.plotg"]], "plotgunfolds() (in module gunfolds.viz.gtool)": [[35, "gunfolds.viz.gtool.plotgunfolds"]]}}) \ No newline at end of file diff --git a/docs/solvers/declarative/clingo_rasl.html b/docs/solvers/declarative/clingo_rasl.html index dc16ad8e..3a12d5f8 100644 --- a/docs/solvers/declarative/clingo_rasl.html +++ b/docs/solvers/declarative/clingo_rasl.html @@ -269,7 +269,7 @@

clingo_rasl#

-gunfolds.solvers.clingo_rasl.drasl(glist, capsize=1, timeout=0, urate=0, weighted=False, scc=False, scc_members=None, dm=None, bdm=None, pnum=3.0, edge_weights=(1, 1), configuration='crafty', optim='optN')[source]#
+gunfolds.solvers.clingo_rasl.drasl(glist, capsize=1, timeout=0, urate=0, weighted=False, scc=False, scc_members=None, dm=None, bdm=None, pnum=4.0, edge_weights=(1, 1), configuration='crafty', optim='optN')[source]#

Compute all candidate causal time-scale graphs that could have generated all undersampled graphs at all possible undersampling rates up to urate in glist each at an unknown undersampling diff --git a/docs/utils/clingo.html b/docs/utils/clingo.html index ebbf8674..3181ceb5 100644 --- a/docs/utils/clingo.html +++ b/docs/utils/clingo.html @@ -269,7 +269,7 @@

clingo#clingo#

-gunfolds.utils.clingo.clingo(command, exact=True, convert=<function drasl_jclingo2g>, timeout=0, capsize=1, configuration='crafty', optim='optN', pnum=3.0)[source]#
+gunfolds.utils.clingo.clingo(command, exact=True, convert=<function drasl_jclingo2g>, timeout=0, capsize=1, configuration='crafty', optim='optN', pnum=4.0)[source]#

Runs run_clingo and returns parsed equivalent class

Parameters:
@@ -322,7 +322,7 @@

clingo#run_clingo#

-gunfolds.utils.clingo.run_clingo(command, exact=True, timeout=0, capsize=1, configuration='tweety', pnum=3.0, optim='optN')[source]#
+gunfolds.utils.clingo.run_clingo(command, exact=True, timeout=0, capsize=1, configuration='tweety', pnum=4.0, optim='optN')[source]#

Open sub-process and run clingo

Parameters: