doc/sv-callers_paired.svg

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<!-- Title: snakemake_dag Pages: 1 -->
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<!-- 1 -->
<g id="node2" class="node">
<title>1</title>
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<!-- 1&#45;&gt;0 -->
<g id="edge1" class="edge">
<title>1&#45;&gt;0</title>
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<!-- 2 -->
<g id="node3" class="node">
<title>2</title>
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<!-- 2&#45;&gt;1 -->
<g id="edge2" class="edge">
<title>2&#45;&gt;1</title>
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<!-- 3 -->
<g id="node4" class="node">
<title>3</title>
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<text text-anchor="middle" x="403" y="-162" font-family="sans" font-size="10.00" fill="#000000">outdir: gridss_out</text>
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<!-- 3&#45;&gt;1 -->
<g id="edge3" class="edge">
<title>3&#45;&gt;1</title>
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<!-- 4 -->
<g id="node5" class="node">
<title>4</title>
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<!-- 4&#45;&gt;1 -->
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<title>4&#45;&gt;1</title>
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<!-- 5 -->
<g id="node6" class="node">
<title>5</title>
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<!-- 5&#45;&gt;1 -->
<g id="edge5" class="edge">
<title>5&#45;&gt;1</title>
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<!-- 6 -->
<g id="node7" class="node">
<title>6</title>
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<!-- 6&#45;&gt;2 -->
<g id="edge6" class="edge">
<title>6&#45;&gt;2</title>
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<!-- 7 -->
<g id="node8" class="node">
<title>7</title>
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<text text-anchor="middle" x="403" y="-239" font-family="sans" font-size="10.00" fill="#000000">path: data/bam/3</text>
<text text-anchor="middle" x="403" y="-228" font-family="sans" font-size="10.00" fill="#000000">tumor: T3</text>
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<!-- 7&#45;&gt;3 -->
<g id="edge7" class="edge">
<title>7&#45;&gt;3</title>
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<!-- 8 -->
<g id="node9" class="node">
<title>8</title>
<path fill="none" stroke="#59d856" stroke-width="2" stroke-dasharray="5,2" d="M561,-273C561,-273 485,-273 485,-273 479,-273 473,-267 473,-261 473,-261 473,-233 473,-233 473,-227 479,-221 485,-221 485,-221 561,-221 561,-221 567,-221 573,-227 573,-233 573,-233 573,-261 573,-261 573,-267 567,-273 561,-273"/>
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<text text-anchor="middle" x="523" y="-239" font-family="sans" font-size="10.00" fill="#000000">path: data/bam/3</text>
<text text-anchor="middle" x="523" y="-228" font-family="sans" font-size="10.00" fill="#000000">tumor: T3</text>
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<!-- 8&#45;&gt;4 -->
<g id="edge8" class="edge">
<title>8&#45;&gt;4</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M523,-220.8965C523,-212.7976 523,-203.794 523,-195.4015"/>
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<!-- 9 -->
<g id="node10" class="node">
<title>9</title>
<path fill="none" stroke="#56d882" stroke-width="2" stroke-dasharray="5,2" d="M683,-273C683,-273 607,-273 607,-273 601,-273 595,-267 595,-261 595,-261 595,-233 595,-233 595,-227 601,-221 607,-221 607,-221 683,-221 683,-221 689,-221 695,-227 695,-233 695,-233 695,-261 695,-261 695,-267 689,-273 683,-273"/>
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<text text-anchor="middle" x="645" y="-239" font-family="sans" font-size="10.00" fill="#000000">path: data/bam/3</text>
<text text-anchor="middle" x="645" y="-228" font-family="sans" font-size="10.00" fill="#000000">tumor: T3</text>
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<!-- 9&#45;&gt;5 -->
<g id="edge9" class="edge">
<title>9&#45;&gt;5</title>
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<!-- 10 -->
<g id="node11" class="node">
<title>10</title>
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<text text-anchor="middle" x="50" y="-360" font-family="sans" font-size="10.00" fill="#000000">delly_p</text>
<text text-anchor="middle" x="50" y="-349" font-family="sans" font-size="10.00" fill="#000000">normal: N3</text>
<text text-anchor="middle" x="50" y="-338" font-family="sans" font-size="10.00" fill="#000000">path: data/bam/3</text>
<text text-anchor="middle" x="50" y="-327" font-family="sans" font-size="10.00" fill="#000000">sv_type: DUP</text>
<text text-anchor="middle" x="50" y="-316" font-family="sans" font-size="10.00" fill="#000000">tumor: T3</text>
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<!-- 10&#45;&gt;6 -->
<g id="edge10" class="edge">
<title>10&#45;&gt;6</title>
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<!-- 11 -->
<g id="node12" class="node">
<title>11</title>
<path fill="none" stroke="#80d856" stroke-width="2" stroke-dasharray="5,2" d="M206,-372C206,-372 130,-372 130,-372 124,-372 118,-366 118,-360 118,-360 118,-321 118,-321 118,-315 124,-309 130,-309 130,-309 206,-309 206,-309 212,-309 218,-315 218,-321 218,-321 218,-360 218,-360 218,-366 212,-372 206,-372"/>
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<text text-anchor="middle" x="168" y="-338" font-family="sans" font-size="10.00" fill="#000000">path: data/bam/3</text>
<text text-anchor="middle" x="168" y="-327" font-family="sans" font-size="10.00" fill="#000000">sv_type: DEL</text>
<text text-anchor="middle" x="168" y="-316" font-family="sans" font-size="10.00" fill="#000000">tumor: T3</text>
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<!-- 11&#45;&gt;6 -->
<g id="edge11" class="edge">
<title>11&#45;&gt;6</title>
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<!-- 12 -->
<g id="node13" class="node">
<title>12</title>
<path fill="none" stroke="#80d856" stroke-width="2" stroke-dasharray="5,2" d="M324,-372C324,-372 248,-372 248,-372 242,-372 236,-366 236,-360 236,-360 236,-321 236,-321 236,-315 242,-309 248,-309 248,-309 324,-309 324,-309 330,-309 336,-315 336,-321 336,-321 336,-360 336,-360 336,-366 330,-372 324,-372"/>
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<text text-anchor="middle" x="286" y="-327" font-family="sans" font-size="10.00" fill="#000000">sv_type: INS</text>
<text text-anchor="middle" x="286" y="-316" font-family="sans" font-size="10.00" fill="#000000">tumor: T3</text>
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<!-- 12&#45;&gt;6 -->
<g id="edge12" class="edge">
<title>12&#45;&gt;6</title>
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<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="289.5001,-275.2566 286,-265.2567 282.5001,-275.2567 289.5001,-275.2566"/>
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<!-- 13 -->
<g id="node14" class="node">
<title>13</title>
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<text text-anchor="middle" x="404" y="-349" font-family="sans" font-size="10.00" fill="#000000">normal: N3</text>
<text text-anchor="middle" x="404" y="-338" font-family="sans" font-size="10.00" fill="#000000">path: data/bam/3</text>
<text text-anchor="middle" x="404" y="-327" font-family="sans" font-size="10.00" fill="#000000">sv_type: INV</text>
<text text-anchor="middle" x="404" y="-316" font-family="sans" font-size="10.00" fill="#000000">tumor: T3</text>
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<!-- 13&#45;&gt;6 -->
<g id="edge13" class="edge">
<title>13&#45;&gt;6</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M364.0506,-308.8452C348.7363,-296.7106 331.5038,-283.056 317.1342,-271.6699"/>
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<!-- 14 -->
<g id="node15" class="node">
<title>14</title>
<path fill="none" stroke="#80d856" stroke-width="2" stroke-dasharray="5,2" d="M560,-372C560,-372 484,-372 484,-372 478,-372 472,-366 472,-360 472,-360 472,-321 472,-321 472,-315 478,-309 484,-309 484,-309 560,-309 560,-309 566,-309 572,-315 572,-321 572,-321 572,-360 572,-360 572,-366 566,-372 560,-372"/>
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<text text-anchor="middle" x="522" y="-316" font-family="sans" font-size="10.00" fill="#000000">tumor: T3</text>
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<!-- 14&#45;&gt;6 -->
<g id="edge14" class="edge">
<title>14&#45;&gt;6</title>
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