rss.xml

<?xml version="1.0" ?>
<rss xmlns:ns0="http://www.w3.org/2005/Atom" version="2.0">
  
  
  
  

  
  
  
  
  <channel lastBuildDate="Mon, 18 Nov 2024 14:22:42 -0000">
    
    
    
    


    
    
    
    
    <title>Software Updates</title>
    
    
    
    


    
    
    
    
    <link>http://docs.nesi.org.nz</link>
    
    
    
    


    
    
    
    
    <description>Automated Software Updates Feed</description>
    
    
    
    


    
    
    
    
    <docs>http://www.rssboard.org/rss-specification</docs>
    
    
    
    


    
    
    
    
    <generator>python-feedgen</generator>
    
    
    
    


    
    
    
    
    <language>en</language>
    
    
    
    


    
    
    
    
    <lastBuildDate>Wed, 16 Oct 2024 02:51:48 +0000</lastBuildDate>
    
    
    
    


    
    
    
    
    <ns0:link href="http://docs.nesi.org.nz/software_updates.xml" rel="self" type="application/rss+xml"/>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>Default version of QuickTree changed from 2.5-GCC-11.3.0 to 2.5-GCC-12.3.0.</title>
      
      
      
      


      
      
      
      
      <category domain="software">QuickTree</category>
      
      
      
      


      
      
      
      
      <category domain="type">defaultChanged</category>
      
      
      
      


      
      
      
      
      <pubDate>Tue, 08 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A0</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>Default version of QuickTree changed from 2.5-GCC-11.3.0 to 2.5-GCC-12.3.0.</title>
      
      
      
      


      
      
      
      
      <category domain="software">QuickTree</category>
      
      
      
      


      
      
      
      
      <category domain="type">defaultChanged</category>
      
      
      
      


      
      
      
      
      <pubDate>Tue, 08 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A1</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>2.5-GCC-12.3.0 added.</title>
      
      
      
      


      
      
      
      
      <category domain="software">QuickTree</category>
      
      
      
      


      
      
      
      
      <category domain="type">versionAdded</category>
      
      
      
      


      
      
      
      
      <pubDate>Tue, 08 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A2</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>Mashtree has been added.</title>
      
      
      
      


      
      
      
      
      <category domain="software">Mashtree</category>
      
      
      
      


      
      
      
      
      <category domain="type">softwareAdded</category>
      
      
      
      


      
      
      
      
      <pubDate>Tue, 08 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A3</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>Default version of pauvre changed from 0.2.3-gimkl-2020a-Python-3.8.2 to
        0.2.3-gimkl-2020a-Python-3.8.2.</title>
      
      
      
      


      
      
      
      
      <category domain="software">pauvre</category>
      
      
      
      


      
      
      
      
      <category domain="type">defaultChanged</category>
      
      
      
      


      
      
      
      
      <pubDate>Mon, 16 Sep 2024 00:00:00 +1200</pubDate>
      
      
      
      


      
      
      
      
      <guid>A4</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>0.2.3-foss-2023a-Python-3.11.6 added.</title>
      
      
      
      


      
      
      
      
      <category domain="software">pauvre</category>
      
      
      
      


      
      
      
      
      <category domain="type">versionAdded</category>
      
      
      
      


      
      
      
      
      <pubDate>Mon, 16 Sep 2024 00:00:00 +1200</pubDate>
      
      
      
      


      
      
      
      
      <guid>A5</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>Default version of BamTools changed from 2.5.1-gimkl-2018b to 2.5.1-gimkl-2018b.</title>
      
      
      
      


      
      
      
      
      <category domain="software">BamTools</category>
      
      
      
      


      
      
      
      
      <category domain="type">defaultChanged</category>
      
      
      
      


      
      
      
      
      <pubDate>Mon, 16 Sep 2024 00:00:00 +1200</pubDate>
      
      
      
      


      
      
      
      
      <guid>A5</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>2.5.2-GCCcore-12.3.0 added.</title>
      
      
      
      


      
      
      
      
      <category domain="software">BamTools</category>
      
      
      
      


      
      
      
      
      <category domain="type">versionAdded</category>
      
      
      
      


      
      
      
      
      <pubDate>Mon, 16 Sep 2024 00:00:00 +1200</pubDate>
      
      
      
      


      
      
      
      
      <guid>A7</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>Default version of QUAST changed from 5.0.2-gimkl-2018b to 5.2.0-foss-2023a.</title>
      
      
      
      


      
      
      
      
      <category domain="software">QUAST</category>
      
      
      
      


      
      
      
      
      <category domain="type">defaultChanged</category>
      
      
      
      


      
      
      
      
      <pubDate>Mon, 16 Sep 2024 00:00:00 +1200</pubDate>
      
      
      
      


      
      
      
      
      <guid>A8</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>Default version of QUAST changed from 5.0.2-gimkl-2018b to 5.2.0-foss-2023a.</title>
      
      
      
      


      
      
      
      
      <category domain="software">QUAST</category>
      
      
      
      


      
      
      
      
      <category domain="type">defaultChanged</category>
      
      
      
      


      
      
      
      
      <pubDate>Mon, 16 Sep 2024 00:00:00 +1200</pubDate>
      
      
      
      


      
      
      
      
      <guid>A9</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>5.2.0-foss-2023a added.</title>
      
      
      
      


      
      
      
      
      <category domain="software">QUAST</category>
      
      
      
      


      
      
      
      
      <category domain="type">versionAdded</category>
      
      
      
      


      
      
      
      
      <pubDate>Mon, 16 Sep 2024 00:00:00 +1200</pubDate>
      
      
      
      


      
      
      
      
      <guid>A10</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>Default version of BEDTools changed from 2.28.0-gimkl-2018b to 2.31.1-GCC-12.3.0.</title>
      
      
      
      


      
      
      
      
      <category domain="software">BEDTools</category>
      
      
      
      


      
      
      
      
      <category domain="type">defaultChanged</category>
      
      
      
      


      
      
      
      
      <pubDate>Mon, 16 Sep 2024 00:00:00 +1200</pubDate>
      
      
      
      


      
      
      
      
      <guid>A11</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>Default version of BEDTools changed from 2.28.0-gimkl-2018b to 2.31.1-GCC-12.3.0.</title>
      
      
      
      


      
      
      
      
      <category domain="software">BEDTools</category>
      
      
      
      


      
      
      
      
      <category domain="type">defaultChanged</category>
      
      
      
      


      
      
      
      
      <pubDate>Mon, 16 Sep 2024 00:00:00 +1200</pubDate>
      
      
      
      


      
      
      
      
      <guid>A11</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>2.31.1-GCC-12.3.0 added.</title>
      
      
      
      


      
      
      
      
      <category domain="software">BEDTools</category>
      
      
      
      


      
      
      
      
      <category domain="type">versionAdded</category>
      
      
      
      


      
      
      
      
      <pubDate>Mon, 16 Sep 2024 00:00:00 +1200</pubDate>
      
      
      
      


      
      
      
      
      <guid>A12</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>Default version of MultiQC changed from 1.13-gimkl-2022a-Python-3.10.5 to
        1.13-gimkl-2022a-Python-3.10.5.</title>
      
      
      
      


      
      
      
      
      <category domain="software">MultiQC</category>
      
      
      
      


      
      
      
      
      <category domain="type">defaultChanged</category>
      
      
      
      


      
      
      
      
      <pubDate>Mon, 16 Sep 2024 00:00:00 +1200</pubDate>
      
      
      
      


      
      
      
      
      <guid>A13</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>1.24.1-foss-2023a-Python-3.11.6 added.</title>
      
      
      
      


      
      
      
      
      <category domain="software">MultiQC</category>
      
      
      
      


      
      
      
      
      <category domain="type">versionAdded</category>
      
      
      
      


      
      
      
      
      <pubDate>Mon, 16 Sep 2024 00:00:00 +1200</pubDate>
      
      
      
      


      
      
      
      
      <guid>A14</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>Default version of NanoPlot changed from 1.41.0-gimkl-2022a-Python-3.10.5 to
        1.41.0-gimkl-2022a-Python-3.10.5.</title>
      
      
      
      


      
      
      
      
      <category domain="software">NanoPlot</category>
      
      
      
      


      
      
      
      
      <category domain="type">defaultChanged</category>
      
      
      
      


      
      
      
      
      <pubDate>Mon, 16 Sep 2024 00:00:00 +1200</pubDate>
      
      
      
      


      
      
      
      
      <guid>A15</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>1.43.0-foss-2023a-Python-3.11.6 added.</title>
      
      
      
      


      
      
      
      
      <category domain="software">NanoPlot</category>
      
      
      
      


      
      
      
      
      <category domain="type">versionAdded</category>
      
      
      
      


      
      
      
      
      <pubDate>Mon, 16 Sep 2024 00:00:00 +1200</pubDate>
      
      
      
      


      
      
      
      
      <guid>A16</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>Default version of TSEBRA changed from 1.1.0-gimkl-2022a-Python-3.10.5 to
        1.1.0-gimkl-2022a-Python-3.10.5.</title>
      
      
      
      


      
      
      
      
      <category domain="software">TSEBRA</category>
      
      
      
      


      
      
      
      
      <category domain="type">defaultChanged</category>
      
      
      
      


      
      
      
      
      <pubDate>Tue, 15 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A17</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>1.1.2.5-gimkl-2022a-Python-3.11.3 added.</title>
      
      
      
      


      
      
      
      
      <category domain="software">TSEBRA</category>
      
      
      
      


      
      
      
      
      <category domain="type">versionAdded</category>
      
      
      
      


      
      
      
      
      <pubDate>Tue, 15 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A18</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>Default version of TSEBRA changed from 1.1.0-gimkl-2022a-Python-3.10.5 to
        1.1.0-gimkl-2022a-Python-3.10.5.</title>
      
      
      
      


      
      
      
      
      <category domain="software">TSEBRA</category>
      
      
      
      


      
      
      
      
      <category domain="type">defaultChanged</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 16 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A19</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>1.1.2.5-gimkl-2022a-Python-3.11.3 added.</title>
      
      
      
      


      
      
      
      
      <category domain="software">TSEBRA</category>
      
      
      
      


      
      
      
      
      <category domain="type">versionAdded</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 16 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A20</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>Default version of binutils changed from 2.27-GCCcore-6.3.0 to 2.26-GCCcore-5.4.0.</title>
      
      
      
      


      
      
      
      
      <category domain="software">binutils</category>
      
      
      
      


      
      
      
      
      <category domain="type">defaultChanged</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 16 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A21</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>make has been removed.</title>
      
      
      
      


      
      
      
      
      <category domain="software">make</category>
      
      
      
      


      
      
      
      
      <category domain="type">softwareRemoved</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 16 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A22</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>Rose has been removed.</title>
      
      
      
      


      
      
      
      
      <category domain="software">Rose</category>
      
      
      
      


      
      
      
      
      <category domain="type">softwareRemoved</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 16 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A23</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>Loki has been removed.</title>
      
      
      
      


      
      
      
      
      <category domain="software">Loki</category>
      
      
      
      


      
      
      
      
      <category domain="type">softwareRemoved</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 16 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A24</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>FPM has been removed.</title>
      
      
      
      


      
      
      
      
      <category domain="software">FPM</category>
      
      
      
      


      
      
      
      
      <category domain="type">softwareRemoved</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 16 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A25</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>ARCSI has been removed.</title>
      
      
      
      


      
      
      
      
      <category domain="software">ARCSI</category>
      
      
      
      


      
      
      
      
      <category domain="type">softwareRemoved</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 16 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A26</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>Anaconda3-Geo2 has been removed.</title>
      
      
      
      


      
      
      
      
      <category domain="software">Anaconda3-Geo2</category>
      
      
      
      


      
      
      
      
      <category domain="type">softwareRemoved</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 16 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A27</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>Cannoli has been removed.</title>
      
      
      
      


      
      
      
      
      <category domain="software">Cannoli</category>
      
      
      
      


      
      
      
      
      <category domain="type">softwareRemoved</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 16 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A28</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>Augustus has been removed.</title>
      
      
      
      


      
      
      
      
      <category domain="software">Augustus</category>
      
      
      
      


      
      
      
      
      <category domain="type">softwareRemoved</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 16 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A29</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>OpenCMISS has been removed.</title>
      
      
      
      


      
      
      
      
      <category domain="software">OpenCMISS</category>
      
      
      
      


      
      
      
      
      <category domain="type">softwareRemoved</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 16 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A30</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>Transrate has been removed.</title>
      
      
      
      


      
      
      
      
      <category domain="software">Transrate</category>
      
      
      
      


      
      
      
      
      <category domain="type">softwareRemoved</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 16 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A31</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>Amber has been removed.</title>
      
      
      
      


      
      
      
      
      <category domain="software">Amber</category>
      
      
      
      


      
      
      
      
      <category domain="type">softwareRemoved</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 16 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A32</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>blasr_libcpp has been removed.</title>
      
      
      
      


      
      
      
      
      <category domain="software">blasr_libcpp</category>
      
      
      
      


      
      
      
      
      <category domain="type">softwareRemoved</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 16 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A33</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>branches has been removed.</title>
      
      
      
      


      
      
      
      
      <category domain="software">branches</category>
      
      
      
      


      
      
      
      
      <category domain="type">softwareRemoved</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 16 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A34</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>PBJelly has been removed.</title>
      
      
      
      


      
      
      
      
      <category domain="software">PBJelly</category>
      
      
      
      


      
      
      
      
      <category domain="type">softwareRemoved</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 16 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A35</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>SOAPdenovo2 has been removed.</title>
      
      
      
      


      
      
      
      
      <category domain="software">SOAPdenovo2</category>
      
      
      
      


      
      
      
      
      <category domain="type">softwareRemoved</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 16 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A36</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>TensorBoard has been removed.</title>
      
      
      
      


      
      
      
      
      <category domain="software">TensorBoard</category>
      
      
      
      


      
      
      
      
      <category domain="type">softwareRemoved</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 16 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A37</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>XGKS has been removed.</title>
      
      
      
      


      
      
      
      
      <category domain="software">XGKS</category>
      
      
      
      


      
      
      
      
      <category domain="type">softwareRemoved</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 16 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A38</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>pyseer has been removed.</title>
      
      
      
      


      
      
      
      
      <category domain="software">pyseer</category>
      
      
      
      


      
      
      
      
      <category domain="type">softwareRemoved</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 16 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A39</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>BLASR has been removed.</title>
      
      
      
      


      
      
      
      
      <category domain="software">BLASR</category>
      
      
      
      


      
      
      
      
      <category domain="type">softwareRemoved</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 16 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A40</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>Octopus has been removed.</title>
      
      
      
      


      
      
      
      
      <category domain="software">Octopus</category>
      
      
      
      


      
      
      
      
      <category domain="type">softwareRemoved</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 16 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A41</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>BerkeleyGW has been removed.</title>
      
      
      
      


      
      
      
      
      <category domain="software">BerkeleyGW</category>
      
      
      
      


      
      
      
      
      <category domain="type">softwareRemoved</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 16 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A42</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>networkx has been removed.</title>
      
      
      
      


      
      
      
      
      <category domain="software">networkx</category>
      
      
      
      


      
      
      
      
      <category domain="type">softwareRemoved</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 16 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A43</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>DendroPy has been removed.</title>
      
      
      
      


      
      
      
      
      <category domain="software">DendroPy</category>
      
      
      
      


      
      
      
      
      <category domain="type">softwareRemoved</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 16 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A44</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>motif has been removed.</title>
      
      
      
      


      
      
      
      
      <category domain="software">motif</category>
      
      
      
      


      
      
      
      
      <category domain="type">softwareRemoved</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 16 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A45</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>skani has been added.</title>
      
      
      
      


      
      
      
      
      <category domain="software">skani</category>
      
      
      
      


      
      
      
      
      <category domain="type">softwareAdded</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 16 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A46</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>Default version of Flye changed from 2.9.3-gimkl-2022a-Python-3.11.3 to
        2.9.5-foss-2023a-Python-3.11.6.</title>
      
      
      
      


      
      
      
      
      <category domain="software">Flye</category>
      
      
      
      


      
      
      
      
      <category domain="type">defaultChanged</category>
      
      
      
      


      
      
      
      
      <pubDate>Thu, 10 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A47</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>2.9.5-foss-2023a-Python-3.11.6 added.</title>
      
      
      
      


      
      
      
      
      <category domain="software">Flye</category>
      
      
      
      


      
      
      
      
      <category domain="type">versionAdded</category>
      
      
      
      


      
      
      
      
      <pubDate>Thu, 10 Oct 2024 00:00:00 +1300</pubDate>
      
      
      
      


      
      
      
      
      <guid>A48</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>FileSender has been added.</title>
      
      
      
      


      
      
      
      
      <category domain="type">softwareAdded</category>
      
      
      
      


      
      
      
      
      <category domain="software">FileSender</category>
      
      
      
      


      
      
      
      
      <pubDate>Thu, 24 Oct 2024 11:16:47 -0000</pubDate>
      
      
      
      


      
      
      
      
      <description>Send large files quickly and securely using REANNZ FileSender.
        https://www.reannz.co.nz/products-and-services/filesender/
        This new module can be loaded with &lt;pre&gt;&lt;code&gt;module load
        FileSender/2.49.0-foss-2023a&lt;/code&gt;&lt;/pre&gt;</description>
      
      
      
      


      
      
      
      
      <guid>A49</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>libsodium has been added.</title>
      
      
      
      


      
      
      
      
      <category domain="type">softwareAdded</category>
      
      
      
      


      
      
      
      
      <category domain="software">libsodium</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 06 Nov 2024 15:23:08 -0000</pubDate>
      
      
      
      


      
      
      
      
      <description>library for encryption, decryption, signatures, password hashing and more.
        https://doc.libsodium.org/
        This new module can be loaded with &lt;pre&gt;&lt;code&gt;module load
        libsodium/1.0.18&lt;/code&gt;&lt;/pre&gt;</description>
      
      
      
      


      
      
      
      
      <guid>A50</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>NextPolish2 has been added.</title>
      
      
      
      


      
      
      
      
      <category domain="type">softwareAdded</category>
      
      
      
      


      
      
      
      
      <category domain="software">NextPolish2</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 06 Nov 2024 15:23:08 -0000</pubDate>
      
      
      
      


      
      
      
      
      <description>a fast and efficient genome polishing tool for long-read assembly
        https://github.com/Nextomics/NextPolish2
        This new module can be loaded with &lt;pre&gt;&lt;code&gt;module load
        NextPolish2/0.2.1-foss-2023a&lt;/code&gt;&lt;/pre&gt;</description>
      
      
      
      


      
      
      
      
      <guid>A51</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>matlab-proxy has been added.</title>
      
      
      
      


      
      
      
      
      <category domain="type">softwareAdded</category>
      
      
      
      


      
      
      
      
      <category domain="software">matlab-proxy</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 06 Nov 2024 15:23:08 -0000</pubDate>
      
      
      
      


      
      
      
      
      <description>Python package which enables you to launch MATLAB and access it from a web
        browser.
        https://github.com/mathworks/matlab-proxy
        This new module can be loaded with &lt;pre&gt;&lt;code&gt;module load
        matlab-proxy/0.23.1-foss-2023a&lt;/code&gt;&lt;/pre&gt;</description>
      
      
      
      


      
      
      
      
      <guid>A52</guid>
      
      
      
      


    
    
    
    
    </item>
    
    
    
    


    
    
    
    
    <item>
      
      
      
      


      
      
      
      
      <title>BreakDancer has been removed.</title>
      
      
      
      


      
      
      
      
      <category domain="type">softwareRemoved</category>
      
      
      
      


      
      
      
      
      <category domain="software">BreakDancer</category>
      
      
      
      


      
      
      
      
      <pubDate>Wed, 06 Nov 2024 15:23:08 -0000</pubDate>
      
      
      
      


      
      
      
      
      <description>BreakDancer has been removed and can no longer be accessed via
        &lt;pre&gt;&lt;code&gt;module load BreakDancer&lt;/code&gt;/&lt;pre&gt;</description>
      
      
      
      


      
      
      
      
      <guid>A53</guid>
      
      
      
      

    
    
    
    
    </item>
    
    
    
    
  
    
    
    
    <item>
      
      
      
      
      
      
      <title>Dorado/0.8.3 added.</title>
      
      
      
      
      
      
      <category domain="type">versionAdded</category>
      
      
      
      
      
      
      <category domain="software">Dorado</category>
      
      
      
      
      
      
      <pubDate>Tue, 12 Nov 2024 11:00:27 -0000</pubDate>
      
      
      
      
      
      
      <description>Dorado has been updated with a new version, 0.8.3. &lt;pre&gt;&lt;code&gt;module load Dorado/0.8.3&lt;/code&gt;/&lt;pre&gt;</description>
      
      
      
      
      
      
      <guid>A64</guid>
      
      
      
    
    
    
    </item>
    
    
    
    
    
    
    <item>
      
      
      
      
      
      
      <title>Default version of Dorado has changed</title>
      
      
      
      
      
      
      <category domain="type">defaultChanged</category>
      
      
      
      
      
      
      <category domain="software">Dorado</category>
      
      
      
      
      
      
      <pubDate>Tue, 12 Nov 2024 11:00:27 -0000</pubDate>
      
      
      
      
      
      
      <description>The default version of Dorado has changed from 0.3.2 to 0.3.2, this is the version that will be loaded when you run &lt;code&gt;module load Dorado&lt;/code&gt;.
If you wish to continue using 0.3.2 in any of your scripts, make sure to change them to &lt;code&gt;module load Dorado/0.3.2&lt;/code&gt;</description>
      
      
      
      
      
      
      <guid>A65</guid>
      
      
      
    
    
    
    </item>
    
    
    
  
    
    
    <item>
      
      
      
      
      <title>cuDNN/8.9.7.29-CUDA-12.3.0 added.</title>
      
      
      
      
      <category domain="type">versionAdded</category>
      
      
      
      
      <category domain="software">cuDNN</category>
      
      
      
      
      <pubDate>Wed, 13 Nov 2024 11:00:28 -0000</pubDate>
      
      
      
      
      <description>cuDNN has been updated with a new version, 8.9.7.29-CUDA-12.3.0. &lt;pre&gt;&lt;code&gt;module load cuDNN/8.9.7.29-CUDA-12.3.0&lt;/code&gt;/&lt;pre&gt;</description>
      
      
      
      
      <guid>A66</guid>
      
      
    
    
    </item>
    
    
    
    
    <item>
      
      
      
      
      <title>Default version of cuDNN has changed</title>
      
      
      
      
      <category domain="type">defaultChanged</category>
      
      
      
      
      <category domain="software">cuDNN</category>
      
      
      
      
      <pubDate>Wed, 13 Nov 2024 11:00:28 -0000</pubDate>
      
      
      
      
      <description>The default version of cuDNN has changed from 7.6.4.38-CUDA-10.1.243 to 7.6.4.38-CUDA-10.1.243, this is the version that will be loaded when you run &lt;code&gt;module load cuDNN&lt;/code&gt;.
If you wish to continue using 7.6.4.38-CUDA-10.1.243 in any of your scripts, make sure to change them to &lt;code&gt;module load cuDNN/7.6.4.38-CUDA-10.1.243&lt;/code&gt;</description>
      
      
      
      
      <guid>A67</guid>
      
      
    
    
    </item>
    
    
    
    
    <item>
      
      
      
      
      <title>CUDA/12.3.0 added.</title>
      
      
      
      
      <category domain="type">versionAdded</category>
      
      
      
      
      <category domain="software">CUDA</category>
      
      
      
      
      <pubDate>Wed, 13 Nov 2024 11:00:28 -0000</pubDate>
      
      
      
      
      <description>CUDA has been updated with a new version, 12.3.0. &lt;pre&gt;&lt;code&gt;module load CUDA/12.3.0&lt;/code&gt;/&lt;pre&gt;</description>
      
      
      
      
      <guid>A68</guid>
      
      
    
    
    </item>
    
    
    
    
    <item>
      
      
      
      
      <title>Default version of CUDA has changed</title>
      
      
      
      
      <category domain="type">defaultChanged</category>
      
      
      
      
      <category domain="software">CUDA</category>
      
      
      
      
      <pubDate>Wed, 13 Nov 2024 11:00:28 -0000</pubDate>
      
      
      
      
      <description>The default version of CUDA has changed from 11.0.2 to 11.0.2, this is the version that will be loaded when you run &lt;code&gt;module load CUDA&lt;/code&gt;.
If you wish to continue using 11.0.2 in any of your scripts, make sure to change them to &lt;code&gt;module load CUDA/11.0.2&lt;/code&gt;</description>
      
      
      
      
      <guid>A69</guid>
      
      
    
    
    </item>
    
    
  
    
    <item>
      
      
      <title>CRABS has been added.</title>
      
      
      <category domain="type">softwareAdded</category>
      
      
      <category domain="software">CRABS</category>
      
      
      <pubDate>Thu, 14 Nov 2024 11:00:26 -0000</pubDate>
      
      
      <description>Creating Reference databases for Amplicon-Based Sequencing.
https://github.com/gjeunen/reference_database_creator
This new module can be loaded with &lt;pre&gt;&lt;code&gt;module load CRABS/1.0.6&lt;/code&gt;&lt;/pre&gt;</description>
      
      
      <guid>A70</guid>
      
    
    </item>
    
  
    <item>
      <title>Default version of Eigen has changed</title>
      <category domain="type">defaultChanged</category>
      <category domain="software">Eigen</category>
      <pubDate>Mon, 18 Nov 2024 14:22:42 -0000</pubDate>
      <description>The default version of Eigen has changed from default to 3.3.9, this is the version that will be loaded when you run &lt;code&gt;module load Eigen&lt;/code&gt;.
If you wish to continue using default in any of your scripts, make sure to change them to &lt;code&gt;module load Eigen/default&lt;/code&gt;</description>
      <guid>A71</guid>
    </item>
    <item>
      <title>Default version of Delft3D has changed</title>
      <category domain="type">defaultChanged</category>
      <category domain="software">Delft3D</category>
      <pubDate>Mon, 18 Nov 2024 14:22:42 -0000</pubDate>
      <description>The default version of Delft3D has changed from default to 141732-intel-2022a, this is the version that will be loaded when you run &lt;code&gt;module load Delft3D&lt;/code&gt;.
If you wish to continue using default in any of your scripts, make sure to change them to &lt;code&gt;module load Delft3D/default&lt;/code&gt;</description>
      <guid>A72</guid>
    </item>
    <item>
      <title>Default version of Singularity has changed</title>
      <category domain="type">defaultChanged</category>
      <category domain="software">Singularity</category>
      <pubDate>Mon, 18 Nov 2024 14:22:42 -0000</pubDate>
      <description>The default version of Singularity has changed from default to 3.11.3, this is the version that will be loaded when you run &lt;code&gt;module load Singularity&lt;/code&gt;.
If you wish to continue using default in any of your scripts, make sure to change them to &lt;code&gt;module load Singularity/default&lt;/code&gt;</description>
      <guid>A73</guid>
    </item>
    <item>
      <title>Default version of LAMMPS has changed</title>
      <category domain="type">defaultChanged</category>
      <category domain="software">LAMMPS</category>
      <pubDate>Mon, 18 Nov 2024 14:22:42 -0000</pubDate>
      <description>The default version of LAMMPS has changed from default to 23Jun2022-gimkl-2022a-kokkos, this is the version that will be loaded when you run &lt;code&gt;module load LAMMPS&lt;/code&gt;.
If you wish to continue using default in any of your scripts, make sure to change them to &lt;code&gt;module load LAMMPS/default&lt;/code&gt;</description>
      <guid>A74</guid>
    </item>
    <item>
      <title>Default version of Apptainer has changed</title>
      <category domain="type">defaultChanged</category>
      <category domain="software">Apptainer</category>
      <pubDate>Mon, 18 Nov 2024 14:22:42 -0000</pubDate>
      <description>The default version of Apptainer has changed from default to 1.2.5, this is the version that will be loaded when you run &lt;code&gt;module load Apptainer&lt;/code&gt;.
If you wish to continue using default in any of your scripts, make sure to change them to &lt;code&gt;module load Apptainer/default&lt;/code&gt;</description>
      <guid>A75</guid>
    </item>
    <item>
      <title>Default version of VASP has changed</title>
      <category domain="type">defaultChanged</category>
      <category domain="software">VASP</category>
      <pubDate>Mon, 18 Nov 2024 14:22:42 -0000</pubDate>
      <description>The default version of VASP has changed from default to 6.4.2-intel-2022a, this is the version that will be loaded when you run &lt;code&gt;module load VASP&lt;/code&gt;.
If you wish to continue using default in any of your scripts, make sure to change them to &lt;code&gt;module load VASP/default&lt;/code&gt;</description>
      <guid>A76</guid>
    </item>
    <item>
      <title>Default version of MATLAB has changed</title>
      <category domain="type">defaultChanged</category>
      <category domain="software">MATLAB</category>
      <pubDate>Mon, 18 Nov 2024 14:22:42 -0000</pubDate>
      <description>The default version of MATLAB has changed from default to 2021b, this is the version that will be loaded when you run &lt;code&gt;module load MATLAB&lt;/code&gt;.
If you wish to continue using default in any of your scripts, make sure to change them to &lt;code&gt;module load MATLAB/default&lt;/code&gt;</description>
      <guid>A77</guid>
    </item>
    <item>
      <title>Default version of ANSYS has changed</title>
      <category domain="type">defaultChanged</category>
      <category domain="software">ANSYS</category>
      <pubDate>Mon, 18 Nov 2024 14:22:42 -0000</pubDate>
      <description>The default version of ANSYS has changed from default to 19.2, this is the version that will be loaded when you run &lt;code&gt;module load ANSYS&lt;/code&gt;.
If you wish to continue using default in any of your scripts, make sure to change them to &lt;code&gt;module load ANSYS/default&lt;/code&gt;</description>
      <guid>A78</guid>
    </item>
    <item>
      <title>Default version of CD-HIT has changed</title>
      <category domain="type">defaultChanged</category>
      <category domain="software">CD-HIT</category>
      <pubDate>Mon, 18 Nov 2024 14:22:42 -0000</pubDate>
      <description>The default version of CD-HIT has changed from default to 4.8.1-GCC-11.3.0, this is the version that will be loaded when you run &lt;code&gt;module load CD-HIT&lt;/code&gt;.
If you wish to continue using default in any of your scripts, make sure to change them to &lt;code&gt;module load CD-HIT/default&lt;/code&gt;</description>
      <guid>A79</guid>
    </item>
    <item>
      <title>Default version of snakemake has changed</title>
      <category domain="type">defaultChanged</category>
      <category domain="software">snakemake</category>
      <pubDate>Mon, 18 Nov 2024 14:22:42 -0000</pubDate>
      <description>The default version of snakemake has changed from default to 7.32.3-gimkl-2022a-Python-3.11.3, this is the version that will be loaded when you run &lt;code&gt;module load snakemake&lt;/code&gt;.
If you wish to continue using default in any of your scripts, make sure to change them to &lt;code&gt;module load snakemake/default&lt;/code&gt;</description>
      <guid>A80</guid>
    </item>
    <item>
      <title>Default version of libpmi has changed</title>
      <category domain="type">defaultChanged</category>
      <category domain="software">libpmi</category>
      <pubDate>Mon, 18 Nov 2024 14:22:42 -0000</pubDate>
      <description>The default version of libpmi has changed from default to 1, this is the version that will be loaded when you run &lt;code&gt;module load libpmi&lt;/code&gt;.
If you wish to continue using default in any of your scripts, make sure to change them to &lt;code&gt;module load libpmi/default&lt;/code&gt;</description>
      <guid>A81</guid>
    </item>
    <item>
      <title>Default version of RepeatModeler has changed</title>
      <category domain="type">defaultChanged</category>
      <category domain="software">RepeatModeler</category>
      <pubDate>Mon, 18 Nov 2024 14:22:42 -0000</pubDate>
      <description>The default version of RepeatModeler has changed from default to 2.0.2a-gimkl-2020a, this is the version that will be loaded when you run &lt;code&gt;module load RepeatModeler&lt;/code&gt;.
If you wish to continue using default in any of your scripts, make sure to change them to &lt;code&gt;module load RepeatModeler/default&lt;/code&gt;</description>
      <guid>A82</guid>
    </item>
  </channel>
  
  
  
  




</rss>