Error: invalid character indexing

[AteeqMKhaliq]

Hi,
I am running celltrek with default settings, but I am encountering the following error, I am not able to debug, please let me know if this can be resolved. Thanks a lot

`s21_h8_celltrek <- CellTrek::celltrek(st_sc_int=ct_train, int_assay='traint', sc_data=sc, sc_assay = 'RNA',
                                   reduction='pca', intp=T, intp_pnt=5000, intp_lin=F, nPCs=30, ntree=1000,
                                   dist_thresh=0.55, top_spot=5, spot_n=5, repel_r=20, repel_iter=20, keep_model=T)$celltrek`

`09:18:32 Optimization finished
Rasterizing points since number of points exceeds 100,000.
To disable this behavior set `raster=FALSE`
Joining, by = c("Var1", "Var2", "value", "val_rsc", "Var1_type", "Var2_type")
Error in intI(j, n = x@Dim[2], dn[[2]], give.dn = FALSE) :
  invalid character indexing
Calls: <Anonymous> ... callGeneric -> eval -> eval -> [ -> [ -> subCsp_cols -> intI
Execution halted.

Regards,
AMK

[kguion1]

I had a similar issue and not sure if this may help: #18