DESCRIPTION

Package: hemibrainr
Type: Package
Title: Code for Working with Data from Janelia FlyEM's Hemibrain Project and the flywire data sets``
Version: 0.5.0
Authors@R: c(
    person("Alexander", "Bates", email = "alexander.shakeel.bates@gmail.com", 
      role = c("aut", "cre"), comment = c(ORCID = "0000-0002-1195-0445")),
    person("Gregory", "Jefferis", email = "jefferis@gmail.com", role = c("aut"), 
      comment = c(ORCID = "0000-0002-0587-9355"))
    )
Description: Useful functions for pre-processing and analysing data from Janelia FlyEM's hemibrain project <https://www.janelia.org/project-team/flyem/hemibrain>. 
             Data can be accessed from a neuPrint instance <https://neuprint.janelia.org/> using the R package neuprintr.
License: GPL-3
Encoding: UTF-8
LazyData: true
LazyDataCompression: xz
Suggests: 
    spelling,
    testthat (>= 2.1.0),
    knitr,
    rmarkdown,
    covr,
    nat.jrcbrains,
    nat.flybrains,
    elmr,
    dbscan,
    RColorBrewer,
    nat.hdf5,
    Rvcg,
    bitsqueezr,
    fastcluster,
    reticulate,
    doParallel,
    qs,
    rdrop2,
    arrow,
    doSNOW,
    ggplot2,
    gridExtra
VignetteBuilder: knitr
Depends:
    R (>= 3.1),
    neuprintr (>= 0.4),
    nat (>= 1.10.2.9),
    fafbseg (>= 0.9.0.9000)
Imports:
    utils,
    googlesheets4 (>= 0.1.1.9100),
    igraph,
    nat.templatebrains,
    rgl,
    yaml,
    dplyr,
    magrittr,
    nabor,
    reshape2,
    stringr,
    memoise,
    rlang,
    foreach,
    grDevices,
    httr,
    jpeg,
    png,
    googledrive,
    jsonlite,
    plyr,
    catmaid,
    progress,
    nat.nblast,
    readr,
    bit64,
    bigstatsr,
    dendextend,
    stats,
    checkmate,
    pbapply,
    snakecase,
    xfun
Remotes: 
    natverse/neuprintr,
    natverse/rcatmaid,
    natverse/nat.templatebrains,
    natverse/nat.jrcbrains,
    natverse/elmr,
    natverse/fafbseg,
    natverse/nat.nblast,
    natverse/nat,
    natverse/nat.flybrains,
    schlegelp/nat.hdf5,
    karthik/rdrop2,
    dbaston/bitsqueezr
Language: en-GB
RoxygenNote: 7.3.1
URL: https://github.com/flyconnectome/hemibrainr, https://flyconnectome.github.io/hemibrainr
BugReports: https://github.com/flyconnectome/hemibrainr/issues