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cookiecutter-test.yml
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name: Cookiecutter Test
on:
push:
pull_request:
env:
MPLBACKEND: "agg"
QT_QPA_PLATFORM: "offscreen"
PROJECT_DIR: "project_name"
IMPORT_NAME: "project_name"
ENTRYPOINT_NAME: "project-name"
PYTHON_VERSION: "3.9"
MAMBA_ROOT_PREFIX: "~/micromamba"
CONDARC_SOURCE: |
notify_outdated_conda: false
pkgs_dirs:
- ~/conda_pkgs_dir
channels:
- conda-forge
add_pip_as_python_dependency: true
auto_activate_base: true
auto_update_conda: false
channel_priority: strict
always_yes: true
changeps1: false
jobs:
pip-tst:
name: "pip"
runs-on: ubuntu-20.04
defaults:
run:
# The following allows for each run step to utilize ~/.bash_profile
# for setting up the per-step initial state.
# --login: a login shell. Source ~/.bash_profile
# -e: exit on first error
# -o pipefail: piped processes are important; fail if they fail
shell: bash --login -eo pipefail {0}
strategy:
matrix:
config_file: [ default_config.yaml, complex_config.yaml]
python_version: [ "3.6", "3.7", "3.8", "3.9", "3.10"]
steps:
- uses: actions/checkout@v3
with:
fetch-depth: 0
- uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python_version }}
- name: Upgrade pip
run: |
pip install --upgrade pip build
- name: Install cookiecutter and requirements
run: |
pip install -r requirements.txt
- name: Check the pip packages in the test env
run: |
pip list
- name: Configure git
run: |
git config --global user.email "[email protected]"
git config --global user.name "PCDS / GitHub CI"
- name: Use the cookiecutter
run: |
cookiecutter . --no-input --config-file tests/${{ matrix.config_file }} --output-dir "$HOME"
- name: Build wheel and source distribution
run: |
export SOURCE_DATE_EPOCH=$(git log -1 --pretty=%ct)
echo "Source date epoch set to ${SOURCE_DATE_EPOCH} for reproducible build"
# See: https://github.com/python/cpython/pull/5200
# And: https://reproducible-builds.org/docs/source-date-epoch/
cd "${HOME}/${PROJECT_DIR}"
python -m build --sdist --wheel --outdir ./dist
- name: Check the source distribution
run: |
cd
python -m venv test-source-env
source test-source-env/bin/activate
cd "${HOME}/${PROJECT_DIR}"
python -m pip install ./dist/*.gz
cd /tmp
python -c "import ${IMPORT_NAME}; print('Imported ${IMPORT_NAME} from ' + ${IMPORT_NAME}.__file__)"
command -v "${ENTRYPOINT_NAME}"
- name: Use the wheel for testing
run: |
cd "${HOME}/${PROJECT_DIR}"
python -m pip install ./dist/*.whl
cd /tmp
python -c "import ${IMPORT_NAME}; print('Imported ${IMPORT_NAME} from ' + ${IMPORT_NAME}.__file__)"
command -v "${ENTRYPOINT_NAME}"
- name: After failure
if: ${{ failure() }}
run: |
(
echo "### Pip list"
echo "<details>"
echo ""
echo '```'
pip list | egrep -v -e "^#"
echo '```'
echo "</details>"
) >> "$GITHUB_STEP_SUMMARY"
- name: Display project structure
if: ${{ always() }}
run: |
cd ~/project_name
tree -apguh -L 4
- name: Upload the built package as an artifact
if: ${{ always() }}
uses: actions/upload-artifact@v3
with:
name: "pip - Cookiecutter Output - ${{ matrix.python_version }} - ${{ matrix.config_file }}"
path: ~/project_name
# conda-test:
# name: "Python 3.9: conda"
# runs-on: ubuntu-20.04
#
# defaults:
# run:
# # The following allows for each run step to utilize ~/.bash_profile
# # for setting up the per-step initial state.
# # --login: a login shell. Source ~/.bash_profile
# # -e: exit on first error
# # -o pipefail: piped processes are important; fail if they fail
# shell: bash --login -eo pipefail {0}
#
# steps:
# - uses: actions/checkout@v3
# with:
# fetch-depth: 0
#
# - name: Configure git
# run: |
# git config --global user.email "[email protected]"
# git config --global user.name "PCDS / GitHub CI"
#
# - name: Set up micromamba and environment
# run: |
# cd "$HOME"
# mkdir logs
# curl -Ls https://micro.mamba.pm/api/micromamba/linux-64/latest | tar -xvj "bin/micromamba"
# mkdir micromamba
#
# echo "Micromamba version: $(bin/micromamba --version)" | tee "$GITHUB_STEP_SUMMARY"
# bin/micromamba shell hook --shell=bash >> ~/.bash_profile
#
# echo "micromamba activate" >> ~/.bash_profile
#
# - name: Configure conda for building
# run: |
# echo "${CONDARC_SOURCE}" > ~/.condarc
# echo "Contents of ~/.condarc:"
# echo "---------------------------"
# cat ~/.condarc
# echo "---------------------------"
#
# - name: Install boa for mambabuild
# run: |
# micromamba install boa conda-verify "python=${PYTHON_VERSION}" pip
# micromamba info
#
# - name: Check condarc
# run: |
# cat ~/.condarc
#
# - name: Install cookiecutter and requirements
# run: |
# pip install -r requirements.txt
#
# - name: Use the cookiecutter
# run: |
# cookiecutter . --no-input --output-dir "$HOME"
#
# - name: Start the next steps in the cookiecutter output
# run: |
# echo "cd \"${HOME}/${PROJECT_DIR}\"" >> ~/.bash_profile
#
# - name: Check the conda recipe
# run: |
# echo "Conda Recipe Folder':' conda-recipe"
# echo "The recipe to be built is as follows:"
# cat "conda-recipe/meta.yaml"
#
# - name: Configure setuptools-scm
# run: |
# micromamba install setuptools-scm
# python -m setuptools_scm
#
# - name: Build the conda package and create the test environment
# run: |
# conda mambabuild "conda-recipe" \
# --quiet \
# --output-folder "$HOME/conda-bld" \
# --no-anaconda-upload \
# --python "${PYTHON_VERSION}" \
# --extra-deps "python==${PYTHON_VERSION}" \
# --keep-old-work \
# 2>&1 | tee $HOME/logs/mambabuild.txt
#
# - name: Upload the built package as an artifact
# uses: actions/upload-artifact@v3
# with:
# name: Python 3.9 - conda - package
# path: ~/conda-bld
#
# - name: Use the pre-built test environment
# run: |
# TEST_ENV_PATH=$(ls -d ${MAMBA_ROOT_PREFIX/#\~/$HOME}/conda-bld/*/*_test_env*)
# echo "The test path should be: ${TEST_ENV_PATH}"
#
# if [ ! -d "${TEST_ENV_PATH}" ]; then
# echo "Something went wrong finding the test environment path. :("
# find ${MAMBA_ROOT_PREFIX/#\~/$HOME}/conda-bld -type d
# exit 1
# fi
#
# echo "micromamba activate ${TEST_ENV_PATH}" >> ~/.bash_profile
#
# - name: Check the conda packages in the test env
# run: |
# conda list
#
# - name: Verify conda-installed package
# run: |
# cd /tmp
# python -c "import ${IMPORT_NAME}; print('Imported ${IMPORT_NAME} from ' + ${IMPORT_NAME}.__file__)"
# command -v "${ENTRYPOINT_NAME}"