The following table provides the licenses for resources contributing nodes or edges to the network. Source indicates the date when and location where the license information was retrieved. Blank values indicate no licensing information was found. Institution indicates where the resource was created. Funder indicates who funded the project and links to the source of the funding information.
Resources are classified into four categories (denoted by ∈):
- Resources that are in the public domain.
- Resources with a license that allows use, redistribution, and modification.
- Resources with a license that forbids use, redistribution, or modification.
- Resources that do not have a license.
The table is sorted by category, then license leniency, then alphabetical order.
| ∈ | Resource | License | Source | Institution | Funder |
|---|---|---|---|---|---|
| 1 | Entrez Gene | custom | 2015-08-31 | NCBI | USFG |
| 1 | LabeledIn† | custom | 2015-08-21 | NCBI | USFG |
| 1 | MEDLINE† | custom | 2015-08-21 | NLM | USFG |
| 1 | MeSH | custom | 2015-08-21 | NCBI | USFG |
| 1 | Pathway Interaction Database | 2016-04-02 | NCI, NPG | USFG | |
| 2 | Disease Ontology | CC BY 3.0 | 2015-08-20 | University of Maryland | NIH, EMBL, DOE |
| 2 | DISEASES | CC BY 4.0 | 2015-08-21 | University of Copenhagen | Novo Nordisk Foundation Center, EU's FP7 |
| 2 | DrugCentral | CC BY 4.0 | 2016-03-19 | University of New Mexico | |
| 2 | Gene Ontology | CC BY 4.0 | 2015-08-21 | Gene Ontology Consortium | NHGRI |
| 2 | GWAS Catalog | custom | 2015-09-17 | EBI | NHGRI |
| 2 | Reactome | custom | 2016-04-02 | CSHL, OICR, EBI | NIH, ORF, EBI, CTTV |
| 2 | LINCS L1000 | custom | 2015-10-16 | Broad Institute | NIH |
| 2 | TISSUES | CC BY 4.0 | 2015-08-21 | University of Copenhagen | Novo Nordisk Foundation, NIH, CSIRO |
| 2 | Uberon | CC BY 3.0 | 2015-08-30 | LBNL, OHSU | NIH, NSF |
| 2 | WikiPathways | CC BY 3.0 / custom | 2015-08-20 | Gladstone Institutes, Maastricht University | NIH |
| 2 | BindingDB | mixed CC BY 3.0 & CC BY-SA 3.0 | 2015-08-21 | BindingDB | NIH |
| 2 | DisGeNET | ODbL | 2015-08-21 | Universitat Pompeu Fabra | ISCIII, IMI, EU's FP7, EFPIA |
| 2 | DrugBank 4.2 | custom | 2015-08-20 | University of Alberta | CIHR, AIHS, TIMC |
| 2 | MEDI† | CC BY-NC-SA 3.0 | 2015-08-21 | Vanderbilt University | NIH |
| 2 | PREDICT† | CC BY-NC-SA 3.0 | 2015-08-21 | Tel‐Aviv University | Israel Science Foundation |
| 2 | SIDER 4 | CC BY-NC-SA 4.0 | 2015-08-21 | EMBL | Novo Nordisk Foundation, EMBL |
| 3 | MSigDB‡ | custom | 2015-08-20 | Broad Institute | NIH |
| 4 | ADEPTUS‡ | Tel Aviv University | Israel Science Foundation, Azrieli Foundation, I-CORE | ||
| 4 | Bgee | University of Lausanne & Swiss Institute of Bioinformatics | Etat de Vaud, SIB | ||
| 4 | DOAF | Northwestern University | NIH | ||
| 4 | ehrlink† | UTHealth | ONC SHARP, NIH | ||
| 4 | Evolutionary Rate Covariation | University of Pittsburgh | Pittsburgh Foundation, PA Department of Health, NIH, NSF | ||
| 4 | hetio-dag | UCSF | NSF | ||
| 4 | Incomplete Interactome | Northeastern University, DFCI | NIH, NHGRI, NHLBI | ||
| 4 | Human Interactome Database | Harvard CCSB | NHGRI, NCI, NSF, DFCI, Ellison Foundation, W. M. Keck Foundation | ||
| 4 | STARGEO | UCSF |
Notes:
- † — does not directly contribute to the network
- ‡ — no longer used for the network
This table was manually compiled by @dhimmel and may contain inaccuracies or omissions. See the corresponding Thinklab discussion for more information on the legal issues surrounding our data integration.