From b261ab5914e2f42ccb38e2e4af5427cbcae98a71 Mon Sep 17 00:00:00 2001
From: Yasemin Bridges <93208398+yaseminbridges@users.noreply.github.com>
Date: Mon, 25 Sep 2023 11:05:57 +0100
Subject: [PATCH] Update config.yaml

---
 config.yaml | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/config.yaml b/config.yaml
index 4594f29..ca77d56 100644
--- a/config.yaml
+++ b/config.yaml
@@ -4,11 +4,11 @@ variant_analysis: True
 gene_analysis: True
 disease_analysis: False
 tool_specific_configuration_options:
-  mode: manual
+  mode: phenopacket # phenopacket or manual
   lirical_jar_executable: lirical-cli-2.0.0-RC2/lirical-cli-2.0.0-RC2.jar
   exomiser_db_configurations:
     exomiser_database:
     exomiser_hg19_database: 2209_hg19_variants.mv.db
     exomiser_hg38_database:
   post_process:
-    sort_order: descending
\ No newline at end of file
+    sort_order: descending