From fbf3fb0dffbb39a72e83da4ac0f09687a6ea35a2 Mon Sep 17 00:00:00 2001 From: katiermullen <102704401+katiermullen@users.noreply.github.com> Date: Tue, 12 Nov 2024 12:03:36 -0700 Subject: [PATCH] obsolete MONDO:0000169 microphthalmia, isolated, with cataract (#8336) * obsolete MONDO:0000169 microphthalmia, isolated, with cataract Closes #7554 * update update xref source due to QC failure * Added "consider" --------- Co-authored-by: Sabrina Toro --- src/ontology/mondo-edit.obo | 15 ++++++--------- 1 file changed, 6 insertions(+), 9 deletions(-) diff --git a/src/ontology/mondo-edit.obo b/src/ontology/mondo-edit.obo index 56e4661f4c..e3dc21e46e 100644 --- a/src/ontology/mondo-edit.obo +++ b/src/ontology/mondo-edit.obo @@ -1681,17 +1681,14 @@ replaced_by: MONDO:0019181 [Term] id: MONDO:0000169 -name: microphthalmia, isolated, with cataract +name: obsolete microphthalmia, isolated, with cataract comment: Reason of obsoletion: out of scope - MONDO:excludeHistoricalDisease. Term to consider: microphthalmia, isolated, with cataract 1-MONDO:0007995 -subset: obsoletion_candidate -xref: OMIMPS:156850 {source="MONDO:equivalentObsolete"} -is_a: MONDO:0000062 {source="MONDO:Redundant", source="https://orcid.org/0000-0002-6601-2165"} ! isolated microphthalmia -intersection_of: MONDO:0000062 ! isolated microphthalmia -intersection_of: disease_has_feature MONDO:0005129 ! cataract -relationship: has_characteristic MONDO:0021152 {source="OMIMPS:156850"} ! inherited +xref: OMIMPS:156850 {source="MONDO:obsoleteEquivalentObsolete"} +property_value: IAO:0000231 OMO:0001000 {source="MONDO:excludeHistoricalDisease"} property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/7554" xsd:anyURI property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/7766" xsd:anyURI -property_value: IAO:0006012 "2024-07-01" xsd:string +is_obsolete: true +consider: MONDO:0007995 [Term] id: MONDO:0000170 @@ -164444,7 +164441,7 @@ xref: MESH:C563582 {source="MONDO:equivalentTo"} xref: OMIM:156850 {source="MONDO:equivalentTo"} xref: Orphanet:2542 {source="OMIM:156850"} xref: UMLS:C1834919 {source="MONDO:equivalentTo", source="MEDGEN:320475", source="MONDO:MEDGEN"} -is_a: MONDO:0000169 {source="DC-OMIM:156850"} ! microphthalmia, isolated, with cataract +is_a: MONDO:0000062 {source="DC-OMIM:156850"} ! isolated microphthalmia is_a: MONDO:0016764 {source="Orphanet:2542/btnt"} ! isolated anophthalmia-microphthalmia syndrome [Term]