From 43a400929e3ceeddde4486bfdc383a72d909c0ce Mon Sep 17 00:00:00 2001 From: Nicole Vasilevsky Date: Tue, 21 Nov 2023 07:49:21 -0800 Subject: [PATCH] merge pineal parenchymal tumor of intermediate differenciation close #6505 --- src/ontology/mondo-edit.obo | 29 ++++++++++++++--------------- 1 file changed, 14 insertions(+), 15 deletions(-) diff --git a/src/ontology/mondo-edit.obo b/src/ontology/mondo-edit.obo index 7d789a7570..6a7a67b1df 100644 --- a/src/ontology/mondo-edit.obo +++ b/src/ontology/mondo-edit.obo @@ -113228,6 +113228,7 @@ is_a: MONDO:0005070 {source="EFO:1000473", source="NCIT:C67237/inferred"} ! neop id: MONDO:0006369 name: pineal parenchymal tumor of intermediate differentiation def: "A WHO grade II or III pineal parenchymal neoplasm of intermediate-grade malignancy, affecting all ages. It is composed of diffuse sheets or large lobules of uniform cells with mild to moderate nuclear atypia and low to moderate level mitotic activity. (Adapted from WHO)" [NCIT:C6967] +subset: ordo_disease {source="Orphanet:251919"} synonym: "pineal parenchymal tumor of intermediate differentiation" EXACT [DOID:5030, NCIT:C6967] synonym: "pineal parenchymal tumor of intermediate differentiation (morphologic abnormality)" EXACT [DOID:5030] synonym: "pineal parenchymal tumors of intermediate differentiation" RELATED [GARD:0010644] @@ -113236,14 +113237,21 @@ synonym: "pineal parenchymal tumours of intermediate differentiation" RELATED OM synonym: "PPTID" RELATED ABBREVIATION [GARD:0010644, ONCOTREE:PPTID] xref: DOID:5030 {source="MONDO:equivalentTo"} xref: EFO:1000474 {source="MONDO:equivalentTo"} +xref: ICD10CM:D44.5 {source="Orphanet:251919/ntbt", source="Orphanet:251919"} xref: NCIT:C6967 {source="EFO:1000474", source="MONDO:equivalentTo", source="DOID:5030", source="MONDO:exact-label-match"} xref: ONCOTREE:PPTID {source="MONDO:equivalentTo"} +xref: Orphanet:251919 {source="MONDO:equivalentTo"} xref: SCTID:31671006 {source="DOID:5030"} xref: SCTID:397379005 {source="DOID:5030"} xref: SCTID:715904005 {source="MONDO:equivalentTo"} -xref: UMLS:C1367859 {source="MONDO:equivalentTo", source="DOID:5030", source="NCIT:C6967"} -is_a: MONDO:0024890 {source="NCIT:C6967"} ! pineal parenchymal cell neoplasm +xref: UMLS:C1367859 {source="MONDO:equivalentTo", source="MONDO:preferredExternal", source="DOID:5030", source="NCIT:C6967"} +xref: UMLS:CN201973 {source="MONDO:equivalentTo"} +is_a: MONDO:0021232 {source="https://orcid.org/0000-0002-5002-8648"} ! pineal body neoplasm +is_a: MONDO:0024890 {source="NCIT:C6967", source="https://orcid.org/0000-0001-5208-3432", source="https://orcid.org/0000-0002-4142-7153"} ! pineal parenchymal cell neoplasm relationship: excluded_subClassOf MONDO:0016722 {source="DOID:5030"} ! pineoblastoma +property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/6505" xsd:anyURI +property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/6651" xsd:anyURI +property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/6752" xsd:anyURI [Term] id: MONDO:0006370 @@ -327715,20 +327723,11 @@ is_a: MONDO:0021232 {source="MONDO:Redundant", source="NCIT:C92624", source="ONC [Term] id: MONDO:0016725 -name: pineal parenchymal tumor of intermediate differenciation -def: "Pineal parenchymal tumor of intermediate differentiation (PPTID) describes a rare type of pineal parenchymal tumor (PPT) of intermediate-grade malignancy manifesting with visual disturbances, headaches, loss of coordination and balance, nausea and vomiting due to obstructive hydrocephalus, and that is classified as either grade II PPTID or grade III PPTID according to the degree of neuronal differentiation and mitotic activity." [Orphanet:251919] -comment: Reason: duplicate. This will be merged with MONDO:0006369 pineal parenchymal tumor of intermediate differentiation' -subset: obsoletion_candidate -subset: ordo_disease {source="Orphanet:251919"} -xref: ICD10CM:D44.5 {source="Orphanet:251919/ntbt", source="Orphanet:251919"} -xref: Orphanet:251919 {source="MONDO:equivalentTo"} -xref: UMLS:CN201973 {source="MONDO:equivalentTo"} -is_a: MONDO:0021232 {source="https://orcid.org/0000-0002-5002-8648"} ! pineal body neoplasm -is_a: MONDO:0024890 {source="https://orcid.org/0000-0001-5208-3432", source="https://orcid.org/0000-0002-4142-7153"} ! pineal parenchymal cell neoplasm +name: obsolete pineal parenchymal tumor of intermediate differenciation +property_value: IAO:0000231 MONDO:TermsMerged property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/6505" xsd:anyURI -property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/6651" xsd:anyURI -property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/6752" xsd:anyURI -property_value: IAO:0006012 "2023-10-01" xsd:string +is_obsolete: true +replaced_by: MONDO:0006369 [Term] id: MONDO:0016726