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Transform drug to nutrient interactions from Micronutrient Information Center to Biolink graph edges #884

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kevinschaper opened this issue Nov 2, 2024 · 1 comment
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@kevinschaper
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kevinschaper commented Nov 2, 2024

https://lpi.oregonstate.edu/mic/

We want to extract from this site using ontogpt, then feed that output into a koza ingest, making sure that we assign publications to the associations. @caufieldjh has a template in place with this PR monarch-initiative/ontogpt#495.

We can use this sitemap as our list of pages
mic_pages.txt

(generated using npx sitemap-generator-cli https://lpi.oregonstate.edu/mic/ and some grep/sed that I'm too embarrassed to repeat)

@kevinschaper kevinschaper added this to the 2024-12 Release milestone Nov 2, 2024
@kevinschaper kevinschaper changed the title Create repo to ingest drug to nutrient interactions from Micronutrient Information Center Transform drug to nutrient interactions from Micronutrient Information Center to Biolink graph edges Nov 2, 2024
@caufieldjh
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Prototype extraction template for this added to ontogpt in monarch-initiative/ontogpt#469

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