buid_and_release.yml

# This workflow will install Python dependencies, run tests and lint with a single version of Python
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions
# About: actions/checkout@v2: Why needed for running code (makefile or not): https://stackoverflow.com/questions/66918575/how-to-use-your-own-makefile-in-github-actions
name: Build and release

on:
  workflow_dispatch:
  schedule:
    - cron: "0 0 * * 0"  # weekly on Sunday at midnight

jobs:
  build_and_release:
    runs-on: ubuntu-latest
    container: obolibrary/odkfull:v1.5
    steps:
    - uses: actions/checkout@v2
    - name: build
      # todo: reactivate `make all`, pending pending https://github.com/monarch-initiative/medgen/issues/11
#      run: make all
      run: export ROBOT_JAVA_ARGS=-Xmx15G; make minimal
    - name: Get current time
      uses: josStorer/get-current-time@v2.0.2
      id: current-time
      with:
        format: YYYY-MM-DD
    - name: Release
      run: echo Uploading files as new release.
    - uses: "marvinpinto/action-automatic-releases@latest"
      with:
        repo_token: "${{ secrets.GITHUB_TOKEN }}"
        automatic_release_tag: "${{ steps.current-time.outputs.formattedTime }}"
        title: "${{ steps.current-time.outputs.formattedTime }}"
        prerelease: false
        # todo: add back `release/medgen-disease-extract.owl`?, pending https://github.com/monarch-initiative/medgen/issues/11
#          output/release/medgen-disease-extract.owl
        files: |
          output/release/medgen.obo
          output/release/medgen.owl.gz
          output/release/medgen-disease-extract.obo
          output/release/medgen-xrefs.robot.template.tsv
          output/release/medgen-xrefs-mesh.robot.template.tsv
          output/release/umls-hpo.sssom.tsv
          output/release/hpo-mesh.sssom.tsv