From 2dcacf1ee22b109cd4fde5f741c2257ff92032b4 Mon Sep 17 00:00:00 2001 From: Circle Ci Date: Fri, 12 Jul 2024 12:27:07 +0000 Subject: [PATCH] doc updates [skip ci] --- dev/.buildinfo | 2 +- .../auto_examples_python.zip | Bin 100022 -> 100022 bytes .../auto_examples_jupyter.zip | Bin 154541 -> 154541 bytes dev/_modules/index.html | 6 +- dev/_modules/mne_bids/copyfiles.html | 6 +- dev/_modules/mne_bids/dig.html | 6 +- dev/_modules/mne_bids/inspect.html | 6 +- dev/_modules/mne_bids/path.html | 6 +- dev/_modules/mne_bids/read.html | 6 +- dev/_modules/mne_bids/report/_report.html | 6 +- dev/_modules/mne_bids/sidecar_updates.html | 6 +- dev/_modules/mne_bids/stats.html | 6 +- dev/_modules/mne_bids/utils.html | 6 +- dev/_modules/mne_bids/write.html | 8 +-- dev/_static/documentation_options.js | 2 +- dev/api.html | 6 +- dev/authors.html | 6 +- dev/auto_examples/anonymize_dataset.html | 66 +++++++++--------- dev/auto_examples/bidspath.html | 8 +-- dev/auto_examples/convert_eeg_to_bids.html | 8 +-- dev/auto_examples/convert_empty_room.html | 8 +-- dev/auto_examples/convert_group_studies.html | 8 +-- dev/auto_examples/convert_ieeg_to_bids.html | 8 +-- dev/auto_examples/convert_mne_sample.html | 54 +++++++------- dev/auto_examples/convert_mri_and_trans.html | 8 +-- dev/auto_examples/convert_nirs_to_bids.html | 8 +-- dev/auto_examples/create_bids_folder.html | 8 +-- dev/auto_examples/mark_bad_channels.html | 8 +-- dev/auto_examples/read_bids_datasets.html | 45 ++++++------ .../rename_brainvision_files.html | 8 +-- dev/auto_examples/sg_execution_times.html | 40 +++++------ dev/auto_examples/update_bids_datasets.html | 8 +-- dev/contribute.html | 6 +- dev/generated/cli.html | 6 +- dev/generated/mne_bids.BIDSPath.html | 6 +- dev/generated/mne_bids.anonymize_dataset.html | 6 +- .../mne_bids.convert_montage_to_mri.html | 6 +- .../mne_bids.convert_montage_to_ras.html | 6 +- ...e_bids.copyfiles.copyfile_brainvision.html | 6 +- .../mne_bids.copyfiles.copyfile_bti.html | 6 +- .../mne_bids.copyfiles.copyfile_ctf.html | 6 +- .../mne_bids.copyfiles.copyfile_edf.html | 6 +- .../mne_bids.copyfiles.copyfile_eeglab.html | 6 +- .../mne_bids.copyfiles.copyfile_kit.html | 6 +- .../mne_bids.find_matching_paths.html | 6 +- .../mne_bids.get_anat_landmarks.html | 6 +- .../mne_bids.get_anonymization_daysback.html | 6 +- .../mne_bids.get_bids_path_from_fname.html | 6 +- dev/generated/mne_bids.get_datatypes.html | 6 +- .../mne_bids.get_entities_from_fname.html | 6 +- dev/generated/mne_bids.get_entity_vals.html | 6 +- .../mne_bids.get_head_mri_trans.html | 6 +- dev/generated/mne_bids.inspect_dataset.html | 6 +- .../mne_bids.make_dataset_description.html | 6 +- dev/generated/mne_bids.make_report.html | 6 +- dev/generated/mne_bids.mark_channels.html | 6 +- dev/generated/mne_bids.print_dir_tree.html | 6 +- dev/generated/mne_bids.read_raw_bids.html | 6 +- .../mne_bids.search_folder_for_text.html | 6 +- .../mne_bids.stats.count_events.html | 8 +-- dev/generated/mne_bids.template_to_head.html | 6 +- .../mne_bids.update_anat_landmarks.html | 6 +- .../mne_bids.update_sidecar_json.html | 6 +- dev/generated/mne_bids.write_anat.html | 6 +- .../mne_bids.write_meg_calibration.html | 6 +- .../mne_bids.write_meg_crosstalk.html | 6 +- dev/generated/mne_bids.write_raw_bids.html | 6 +- dev/genindex.html | 6 +- dev/index.html | 6 +- dev/install.html | 6 +- dev/objects.inv | Bin 3758 -> 3759 bytes dev/py-modindex.html | 6 +- dev/search.html | 6 +- dev/searchindex.js | 2 +- dev/sg_execution_times.html | 40 +++++------ dev/use.html | 6 +- dev/whats_new.html | 9 +-- dev/whats_new_previous_releases.html | 6 +- 78 files changed, 342 insertions(+), 340 deletions(-) diff --git a/dev/.buildinfo b/dev/.buildinfo index 890261f1b..088c2198d 100644 --- a/dev/.buildinfo +++ b/dev/.buildinfo @@ -1,4 +1,4 @@ # Sphinx build info version 1 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done. -config: c2ef4344a071e605aefd65f27694da40 +config: e6bcad15472edbff205161d3a33127f4 tags: 645f666f9bcd5a90fca523b33c5a78b7 diff --git a/dev/_downloads/07fcc19ba03226cd3d83d4e40ec44385/auto_examples_python.zip b/dev/_downloads/07fcc19ba03226cd3d83d4e40ec44385/auto_examples_python.zip index 4e99a6ef3f8a8914b03e044adde9b5caedec4bb0..fc0c7f994d7a960a3f8028f4f3b5fa5ff1e3fbd4 100644 GIT binary patch delta 242 zcmdni%eJkTjVHjHnMH&F1l*H1@|==oGD+TiLw2qVok z0}4#K$(v>zsgBP|Igx8%*weA* z3^FT9e_qnw{K>20a`J=6+~+%Pe0wv=m_HT zwJC#kW=2O4 zpRa|{325c?pcaU_DJ_idKr5%;Z2`&y^((YO=;T&LbD)*e=YaSh{HEV;WpoC~tF!^> LpMKLb+ZcTTam!!N diff --git a/dev/_downloads/6f1e7a639e0699d6164445b55e6c116d/auto_examples_jupyter.zip b/dev/_downloads/6f1e7a639e0699d6164445b55e6c116d/auto_examples_jupyter.zip index e419b839a2394078619264f8839cd8048c492df8..8a317ccb0bbee8eb5a711344f83e6bd41e90d4ac 100644 GIT binary patch delta 247 zcmZ3xopbGWPM!d7W)=|!5b#aj$fK#nB@(<4B%Zu0bn5lk*X zd#68-U~&b~dXYeNK>6ZGCNH41)AvUL<=vB~vqnK^?4V>9bFH~{On3b@U(0BaX1eOPIiiKdkm-)! z=D4jt!F1&F>9gPVqd|;ed?1EwBI9mt5aU)4;}JQg zPk!4MtY+lQ1c|H`Vakza`sue_(tv5bI*>8_R5+6}(BA3%5lrqtbEiju=&OFy7e+9- z0PUUrJc7v;MC(NY)dA&;BbmH_)=u9a36%frH=Q*KLVHIsS%LWNApR%6>1U&u+(3NM NXdn%=CpMZX000-WTs8mz diff --git a/dev/_modules/index.html b/dev/_modules/index.html index b1d6fd13e..d79b501d5 100644 --- a/dev/_modules/index.html +++ b/dev/_modules/index.html @@ -7,7 +7,7 @@ - Overview: module code — MNE-BIDS 0.16.0.dev9+gf4f903af documentation + Overview: module code — MNE-BIDS 0.16.0.dev10+g4c3e7535 documentation @@ -40,7 +40,7 @@ - + @@ -147,7 +147,7 @@ -

MNE-BIDS 0.16.0.dev9+gf4f903af documentation

+

MNE-BIDS 0.16.0.dev10+g4c3e7535 documentation

diff --git a/dev/_modules/mne_bids/copyfiles.html b/dev/_modules/mne_bids/copyfiles.html index f10e3a5be..418f000fa 100644 --- a/dev/_modules/mne_bids/copyfiles.html +++ b/dev/_modules/mne_bids/copyfiles.html @@ -7,7 +7,7 @@ - mne_bids.copyfiles — MNE-BIDS 0.16.0.dev9+gf4f903af documentation + mne_bids.copyfiles — MNE-BIDS 0.16.0.dev10+g4c3e7535 documentation @@ -40,7 +40,7 @@ - + @@ -147,7 +147,7 @@ -

MNE-BIDS 0.16.0.dev9+gf4f903af documentation

+

MNE-BIDS 0.16.0.dev10+g4c3e7535 documentation

diff --git a/dev/_modules/mne_bids/dig.html b/dev/_modules/mne_bids/dig.html index 6cd17ab8f..f781718c3 100644 --- a/dev/_modules/mne_bids/dig.html +++ b/dev/_modules/mne_bids/dig.html @@ -7,7 +7,7 @@ - mne_bids.dig — MNE-BIDS 0.16.0.dev9+gf4f903af documentation + mne_bids.dig — MNE-BIDS 0.16.0.dev10+g4c3e7535 documentation @@ -40,7 +40,7 @@ - + @@ -147,7 +147,7 @@ -

MNE-BIDS 0.16.0.dev9+gf4f903af documentation

+

MNE-BIDS 0.16.0.dev10+g4c3e7535 documentation

diff --git a/dev/_modules/mne_bids/inspect.html b/dev/_modules/mne_bids/inspect.html index 10eb25cf3..bb97f6ff0 100644 --- a/dev/_modules/mne_bids/inspect.html +++ b/dev/_modules/mne_bids/inspect.html @@ -7,7 +7,7 @@ - mne_bids.inspect — MNE-BIDS 0.16.0.dev9+gf4f903af documentation + mne_bids.inspect — MNE-BIDS 0.16.0.dev10+g4c3e7535 documentation @@ -40,7 +40,7 @@ - + @@ -147,7 +147,7 @@ -

MNE-BIDS 0.16.0.dev9+gf4f903af documentation

+

MNE-BIDS 0.16.0.dev10+g4c3e7535 documentation

diff --git a/dev/_modules/mne_bids/path.html b/dev/_modules/mne_bids/path.html index 8dd9aa82d..cfd4b2b33 100644 --- a/dev/_modules/mne_bids/path.html +++ b/dev/_modules/mne_bids/path.html @@ -7,7 +7,7 @@ - mne_bids.path — MNE-BIDS 0.16.0.dev9+gf4f903af documentation + mne_bids.path — MNE-BIDS 0.16.0.dev10+g4c3e7535 documentation @@ -40,7 +40,7 @@ - + @@ -147,7 +147,7 @@ -

MNE-BIDS 0.16.0.dev9+gf4f903af documentation

+

MNE-BIDS 0.16.0.dev10+g4c3e7535 documentation

diff --git a/dev/_modules/mne_bids/read.html b/dev/_modules/mne_bids/read.html index 7dedec388..15fa807bf 100644 --- a/dev/_modules/mne_bids/read.html +++ b/dev/_modules/mne_bids/read.html @@ -7,7 +7,7 @@ - mne_bids.read — MNE-BIDS 0.16.0.dev9+gf4f903af documentation + mne_bids.read — MNE-BIDS 0.16.0.dev10+g4c3e7535 documentation @@ -40,7 +40,7 @@ - + @@ -147,7 +147,7 @@ -

MNE-BIDS 0.16.0.dev9+gf4f903af documentation

+

MNE-BIDS 0.16.0.dev10+g4c3e7535 documentation

diff --git a/dev/_modules/mne_bids/report/_report.html b/dev/_modules/mne_bids/report/_report.html index e4b97bd21..071c35c2f 100644 --- a/dev/_modules/mne_bids/report/_report.html +++ b/dev/_modules/mne_bids/report/_report.html @@ -7,7 +7,7 @@ - mne_bids.report._report — MNE-BIDS 0.16.0.dev9+gf4f903af documentation + mne_bids.report._report — MNE-BIDS 0.16.0.dev10+g4c3e7535 documentation @@ -40,7 +40,7 @@ - + @@ -147,7 +147,7 @@ -

MNE-BIDS 0.16.0.dev9+gf4f903af documentation

+

MNE-BIDS 0.16.0.dev10+g4c3e7535 documentation

diff --git a/dev/_modules/mne_bids/sidecar_updates.html b/dev/_modules/mne_bids/sidecar_updates.html index a3c14de66..ea37d17f3 100644 --- a/dev/_modules/mne_bids/sidecar_updates.html +++ b/dev/_modules/mne_bids/sidecar_updates.html @@ -7,7 +7,7 @@ - mne_bids.sidecar_updates — MNE-BIDS 0.16.0.dev9+gf4f903af documentation + mne_bids.sidecar_updates — MNE-BIDS 0.16.0.dev10+g4c3e7535 documentation @@ -40,7 +40,7 @@ - + @@ -147,7 +147,7 @@ -

MNE-BIDS 0.16.0.dev9+gf4f903af documentation

+

MNE-BIDS 0.16.0.dev10+g4c3e7535 documentation

diff --git a/dev/_modules/mne_bids/stats.html b/dev/_modules/mne_bids/stats.html index e32698b9b..b8e1b80f7 100644 --- a/dev/_modules/mne_bids/stats.html +++ b/dev/_modules/mne_bids/stats.html @@ -7,7 +7,7 @@ - mne_bids.stats — MNE-BIDS 0.16.0.dev9+gf4f903af documentation + mne_bids.stats — MNE-BIDS 0.16.0.dev10+g4c3e7535 documentation @@ -40,7 +40,7 @@ - + @@ -147,7 +147,7 @@ -

MNE-BIDS 0.16.0.dev9+gf4f903af documentation

+

MNE-BIDS 0.16.0.dev10+g4c3e7535 documentation

diff --git a/dev/_modules/mne_bids/utils.html b/dev/_modules/mne_bids/utils.html index b748c8b69..d3749db47 100644 --- a/dev/_modules/mne_bids/utils.html +++ b/dev/_modules/mne_bids/utils.html @@ -7,7 +7,7 @@ - mne_bids.utils — MNE-BIDS 0.16.0.dev9+gf4f903af documentation + mne_bids.utils — MNE-BIDS 0.16.0.dev10+g4c3e7535 documentation @@ -40,7 +40,7 @@ - + @@ -147,7 +147,7 @@ -

MNE-BIDS 0.16.0.dev9+gf4f903af documentation

+

MNE-BIDS 0.16.0.dev10+g4c3e7535 documentation

diff --git a/dev/_modules/mne_bids/write.html b/dev/_modules/mne_bids/write.html index 05fe37d31..51158e12b 100644 --- a/dev/_modules/mne_bids/write.html +++ b/dev/_modules/mne_bids/write.html @@ -7,7 +7,7 @@ - mne_bids.write — MNE-BIDS 0.16.0.dev9+gf4f903af documentation + mne_bids.write — MNE-BIDS 0.16.0.dev10+g4c3e7535 documentation @@ -40,7 +40,7 @@ - + @@ -147,7 +147,7 @@ -

MNE-BIDS 0.16.0.dev9+gf4f903af documentation

+

MNE-BIDS 0.16.0.dev10+g4c3e7535 documentation

@@ -2337,7 +2337,7 @@

Source code for mne_bids.write

         er_bids_path = bids_path.copy().update(
             subject="emptyroom", session=er_session, task="noise", run=None
         )
-        write_raw_bids(
+        er_bids_path = write_raw_bids(
             raw=empty_room,
             bids_path=er_bids_path,
             events=None,
diff --git a/dev/_static/documentation_options.js b/dev/_static/documentation_options.js
index da3f2f92b..f7d97be7d 100644
--- a/dev/_static/documentation_options.js
+++ b/dev/_static/documentation_options.js
@@ -1,5 +1,5 @@
 const DOCUMENTATION_OPTIONS = {
-    VERSION: '0.16.0.dev9+gf4f903af',
+    VERSION: '0.16.0.dev10+g4c3e7535',
     LANGUAGE: 'en',
     COLLAPSE_INDEX: false,
     BUILDER: 'html',
diff --git a/dev/api.html b/dev/api.html
index cf7f6f7ba..52ca1f61e 100644
--- a/dev/api.html
+++ b/dev/api.html
@@ -8,7 +8,7 @@
     
     
 
-    API Documentation — MNE-BIDS 0.16.0.dev9+gf4f903af documentation
+    API Documentation — MNE-BIDS 0.16.0.dev10+g4c3e7535 documentation
   
   
   
@@ -41,7 +41,7 @@
 
   
 
-    
+    
     
     
     
@@ -150,7 +150,7 @@
   
   
   
-    
MNE-BIDS 0.16.0.dev9+gf4f903af documentation

+    
MNE-BIDS 0.16.0.dev10+g4c3e7535 documentation
diff --git a/dev/authors.html b/dev/authors.html index 49856e736..032a8115a 100644 --- a/dev/authors.html +++ b/dev/authors.html @@ -8,7 +8,7 @@ - <no title> — MNE-BIDS 0.16.0.dev9+gf4f903af documentation + <no title> — MNE-BIDS 0.16.0.dev10+g4c3e7535 documentation @@ -41,7 +41,7 @@ - + @@ -148,7 +148,7 @@ -

MNE-BIDS 0.16.0.dev9+gf4f903af documentation

+

MNE-BIDS 0.16.0.dev10+g4c3e7535 documentation

diff --git a/dev/auto_examples/anonymize_dataset.html b/dev/auto_examples/anonymize_dataset.html index a49142ed4..510a9cdd9 100644 --- a/dev/auto_examples/anonymize_dataset.html +++ b/dev/auto_examples/anonymize_dataset.html @@ -8,7 +8,7 @@ - 13. Anonymizing a BIDS dataset — MNE-BIDS 0.16.0.dev9+gf4f903af documentation + 13. Anonymizing a BIDS dataset — MNE-BIDS 0.16.0.dev10+g4c3e7535 documentation @@ -41,7 +41,7 @@ - + @@ -151,7 +151,7 @@ -

MNE-BIDS 0.16.0.dev9+gf4f903af documentation

+

MNE-BIDS 0.16.0.dev10+g4c3e7535 documentation

@@ -675,7 +675,7 @@

Basic anonymizationSpecifying subject IDsSpecifying subject IDsSpecifying subject IDs @@ -930,9 +930,9 @@

ReproducibilityTotal running time of the script: (0 minutes 11.637 seconds)

+

Total running time of the script: (0 minutes 11.228 seconds)

 -

Total running time of the script: (0 minutes 1.285 seconds)

+

Total running time of the script: (0 minutes 1.235 seconds)

This should be very similar to the ds000248 dataset_description.json!

-

Total running time of the script: (0 minutes 3.827 seconds)

+

Total running time of the script: (0 minutes 3.663 seconds)