From 24cd7717daa4b56fcfaded08f1059e1248df02c8 Mon Sep 17 00:00:00 2001 From: Circle Ci Date: Tue, 9 Apr 2024 06:48:11 +0000 Subject: [PATCH] doc updates [skip ci] --- dev/.buildinfo | 2 +- .../auto_examples_python.zip | Bin 100936 -> 100936 bytes .../auto_examples_jupyter.zip | Bin 155421 -> 155421 bytes .../sphx_glr_convert_eeg_to_bids_001.png | Bin 40912 -> 40912 bytes .../sphx_glr_convert_ieeg_to_bids_001.png | Bin 84669 -> 84669 bytes .../sphx_glr_convert_mne_sample_001.png | Bin 174429 -> 174429 bytes .../sphx_glr_convert_mri_and_trans_001.png | Bin 201520 -> 201520 bytes .../sphx_glr_convert_mri_and_trans_002.png | Bin 85747 -> 85747 bytes .../sphx_glr_convert_mri_and_trans_003.png | Bin 94058 -> 94058 bytes .../sphx_glr_convert_mri_and_trans_004.png | Bin 94058 -> 94058 bytes .../sphx_glr_convert_nirs_to_bids_001.png | Bin 33388 -> 33388 bytes .../sphx_glr_mark_bad_channels_001.png | Bin 220481 -> 220481 bytes .../sphx_glr_mark_bad_channels_002.png | Bin 172843 -> 172843 bytes .../sphx_glr_read_bids_datasets_001.png | Bin 375349 -> 375349 bytes dev/_modules/index.html | 8 +- dev/_modules/mne_bids/copyfiles.html | 8 +- dev/_modules/mne_bids/dig.html | 8 +- dev/_modules/mne_bids/inspect.html | 8 +- dev/_modules/mne_bids/path.html | 8 +- dev/_modules/mne_bids/read.html | 8 +- dev/_modules/mne_bids/report/_report.html | 8 +- dev/_modules/mne_bids/sidecar_updates.html | 8 +- dev/_modules/mne_bids/stats.html | 8 +- dev/_modules/mne_bids/utils.html | 8 +- dev/_modules/mne_bids/write.html | 8 +- dev/_static/documentation_options.js | 2 +- dev/api.html | 8 +- dev/authors.html | 8 +- dev/auto_examples/anonymize_dataset.html | 70 +++++++++--------- dev/auto_examples/bidspath.html | 10 +-- dev/auto_examples/convert_eeg_to_bids.html | 10 +-- dev/auto_examples/convert_empty_room.html | 10 +-- dev/auto_examples/convert_group_studies.html | 10 +-- dev/auto_examples/convert_ieeg_to_bids.html | 10 +-- dev/auto_examples/convert_mne_sample.html | 10 +-- dev/auto_examples/convert_mri_and_trans.html | 10 +-- dev/auto_examples/convert_nirs_to_bids.html | 10 +-- dev/auto_examples/create_bids_folder.html | 8 +- dev/auto_examples/mark_bad_channels.html | 10 +-- dev/auto_examples/read_bids_datasets.html | 54 +++++++------- .../rename_brainvision_files.html | 10 +-- dev/auto_examples/sg_execution_times.html | 36 ++++----- dev/auto_examples/update_bids_datasets.html | 10 +-- dev/contribute.html | 8 +- dev/generated/cli.html | 8 +- dev/generated/mne_bids.BIDSPath.html | 8 +- dev/generated/mne_bids.anonymize_dataset.html | 8 +- .../mne_bids.convert_montage_to_mri.html | 8 +- .../mne_bids.convert_montage_to_ras.html | 8 +- ...e_bids.copyfiles.copyfile_brainvision.html | 8 +- .../mne_bids.copyfiles.copyfile_bti.html | 8 +- .../mne_bids.copyfiles.copyfile_ctf.html | 8 +- .../mne_bids.copyfiles.copyfile_edf.html | 8 +- .../mne_bids.copyfiles.copyfile_eeglab.html | 8 +- .../mne_bids.copyfiles.copyfile_kit.html | 8 +- .../mne_bids.find_matching_paths.html | 8 +- .../mne_bids.get_anat_landmarks.html | 8 +- .../mne_bids.get_anonymization_daysback.html | 8 +- .../mne_bids.get_bids_path_from_fname.html | 8 +- dev/generated/mne_bids.get_datatypes.html | 8 +- .../mne_bids.get_entities_from_fname.html | 8 +- dev/generated/mne_bids.get_entity_vals.html | 8 +- .../mne_bids.get_head_mri_trans.html | 8 +- dev/generated/mne_bids.inspect_dataset.html | 8 +- .../mne_bids.make_dataset_description.html | 8 +- dev/generated/mne_bids.make_report.html | 8 +- dev/generated/mne_bids.mark_channels.html | 8 +- dev/generated/mne_bids.print_dir_tree.html | 8 +- dev/generated/mne_bids.read_raw_bids.html | 8 +- .../mne_bids.search_folder_for_text.html | 8 +- .../mne_bids.stats.count_events.html | 10 +-- dev/generated/mne_bids.template_to_head.html | 8 +- .../mne_bids.update_anat_landmarks.html | 8 +- .../mne_bids.update_sidecar_json.html | 8 +- dev/generated/mne_bids.write_anat.html | 8 +- .../mne_bids.write_meg_calibration.html | 8 +- .../mne_bids.write_meg_crosstalk.html | 8 +- dev/generated/mne_bids.write_raw_bids.html | 8 +- dev/genindex.html | 8 +- dev/index.html | 8 +- dev/install.html | 8 +- dev/objects.inv | Bin 3746 -> 3746 bytes dev/py-modindex.html | 8 +- dev/search.html | 8 +- dev/searchindex.js | 2 +- dev/sg_execution_times.html | 36 ++++----- dev/use.html | 8 +- dev/whats_new.html | 8 +- dev/whats_new_previous_releases.html | 8 +- 89 files changed, 384 insertions(+), 386 deletions(-) diff --git a/dev/.buildinfo b/dev/.buildinfo index b522d5553..73968fc76 100644 --- a/dev/.buildinfo +++ b/dev/.buildinfo @@ -1,4 +1,4 @@ # Sphinx build info version 1 # This file hashes the configuration used when building these files. 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MNE-BIDS 0.15.0.dev47+g598ff7f2 documentation

+

MNE-BIDS 0.15.0.dev48+ge8eb7a7f documentation

@@ -568,7 +568,7 @@

All modules for which code is available

- © Copyright 2017-2024, MNE Developers. Last updated on 2024-04-02. + © Copyright 2017-2024, MNE Developers. Last updated on 2024-04-09.

diff --git a/dev/_modules/mne_bids/copyfiles.html b/dev/_modules/mne_bids/copyfiles.html index e9616ec10..d6f6515d8 100644 --- a/dev/_modules/mne_bids/copyfiles.html +++ b/dev/_modules/mne_bids/copyfiles.html @@ -7,7 +7,7 @@ - mne_bids.copyfiles — MNE-BIDS 0.15.0.dev47+g598ff7f2 documentation + mne_bids.copyfiles — MNE-BIDS 0.15.0.dev48+ge8eb7a7f documentation @@ -40,7 +40,7 @@ - + @@ -144,7 +144,7 @@ -

MNE-BIDS 0.15.0.dev47+g598ff7f2 documentation

+

MNE-BIDS 0.15.0.dev48+ge8eb7a7f documentation

@@ -1221,7 +1221,7 @@

Source code for mne_bids.copyfiles

 
   

     
-      © Copyright 2017-2024, MNE Developers. Last updated on 2024-04-02.
+      © Copyright 2017-2024, MNE Developers. Last updated on 2024-04-09.
       

     
   

diff --git a/dev/_modules/mne_bids/dig.html b/dev/_modules/mne_bids/dig.html
index 9cc850978..2aed9e9b2 100644
--- a/dev/_modules/mne_bids/dig.html
+++ b/dev/_modules/mne_bids/dig.html
@@ -7,7 +7,7 @@
   
     
     
-    mne_bids.dig — MNE-BIDS 0.15.0.dev47+g598ff7f2 documentation
+    mne_bids.dig — MNE-BIDS 0.15.0.dev48+ge8eb7a7f documentation
   
   
   
@@ -40,7 +40,7 @@
 
   
 
-    
+    
     
     
     
@@ -144,7 +144,7 @@
   
   
   
-    
MNE-BIDS 0.15.0.dev47+g598ff7f2 documentation

+    
MNE-BIDS 0.15.0.dev48+ge8eb7a7f documentation
@@ -1363,7 +1363,7 @@

Source code for mne_bids.dig

 
   

     
-      © Copyright 2017-2024, MNE Developers. Last updated on 2024-04-02.
+      © Copyright 2017-2024, MNE Developers. Last updated on 2024-04-09.
       

     
   

diff --git a/dev/_modules/mne_bids/inspect.html b/dev/_modules/mne_bids/inspect.html
index 4a87f5d64..be344ed4b 100644
--- a/dev/_modules/mne_bids/inspect.html
+++ b/dev/_modules/mne_bids/inspect.html
@@ -7,7 +7,7 @@
   
     
     
-    mne_bids.inspect — MNE-BIDS 0.15.0.dev47+g598ff7f2 documentation
+    mne_bids.inspect — MNE-BIDS 0.15.0.dev48+ge8eb7a7f documentation
   
   
   
@@ -40,7 +40,7 @@
 
   
 
-    
+    
     
     
     
@@ -144,7 +144,7 @@
   
   
   
-    
MNE-BIDS 0.15.0.dev47+g598ff7f2 documentation

+    
MNE-BIDS 0.15.0.dev48+ge8eb7a7f documentation
@@ -1017,7 +1017,7 @@

Source code for mne_bids.inspect

 
   

     
-      © Copyright 2017-2024, MNE Developers. Last updated on 2024-04-02.
+      © Copyright 2017-2024, MNE Developers. Last updated on 2024-04-09.
       

     
   

diff --git a/dev/_modules/mne_bids/path.html b/dev/_modules/mne_bids/path.html
index 015091455..35665d3c5 100644
--- a/dev/_modules/mne_bids/path.html
+++ b/dev/_modules/mne_bids/path.html
@@ -7,7 +7,7 @@
   
     
     
-    mne_bids.path — MNE-BIDS 0.15.0.dev47+g598ff7f2 documentation
+    mne_bids.path — MNE-BIDS 0.15.0.dev48+ge8eb7a7f documentation
   
   
   
@@ -40,7 +40,7 @@
 
   
 
-    
+    
     
     
     
@@ -144,7 +144,7 @@
   
   
   
-    
MNE-BIDS 0.15.0.dev47+g598ff7f2 documentation

+    
MNE-BIDS 0.15.0.dev48+ge8eb7a7f documentation
@@ -3099,7 +3099,7 @@

Source code for mne_bids.path

 
   

     
-      © Copyright 2017-2024, MNE Developers. Last updated on 2024-04-02.
+      © Copyright 2017-2024, MNE Developers. Last updated on 2024-04-09.
       

     
   

diff --git a/dev/_modules/mne_bids/read.html b/dev/_modules/mne_bids/read.html
index 281b9feec..359349359 100644
--- a/dev/_modules/mne_bids/read.html
+++ b/dev/_modules/mne_bids/read.html
@@ -7,7 +7,7 @@
   
     
     
-    mne_bids.read — MNE-BIDS 0.15.0.dev47+g598ff7f2 documentation
+    mne_bids.read — MNE-BIDS 0.15.0.dev48+ge8eb7a7f documentation
   
   
   
@@ -40,7 +40,7 @@
 
   
 
-    
+    
     
     
     
@@ -144,7 +144,7 @@
   
   
   
-    
MNE-BIDS 0.15.0.dev47+g598ff7f2 documentation

+    
MNE-BIDS 0.15.0.dev48+ge8eb7a7f documentation
@@ -1741,7 +1741,7 @@

Source code for mne_bids.read

 
   

     
-      © Copyright 2017-2024, MNE Developers. Last updated on 2024-04-02.
+      © Copyright 2017-2024, MNE Developers. Last updated on 2024-04-09.
       

     
   

diff --git a/dev/_modules/mne_bids/report/_report.html b/dev/_modules/mne_bids/report/_report.html
index 0c1e3fd66..ed6651399 100644
--- a/dev/_modules/mne_bids/report/_report.html
+++ b/dev/_modules/mne_bids/report/_report.html
@@ -7,7 +7,7 @@
   
     
     
-    mne_bids.report._report — MNE-BIDS 0.15.0.dev47+g598ff7f2 documentation
+    mne_bids.report._report — MNE-BIDS 0.15.0.dev48+ge8eb7a7f documentation
   
   
   
@@ -40,7 +40,7 @@
 
   
 
-    
+    
     
     
     
@@ -144,7 +144,7 @@
   
   
   
-    
MNE-BIDS 0.15.0.dev47+g598ff7f2 documentation

+    
MNE-BIDS 0.15.0.dev48+ge8eb7a7f documentation
@@ -1102,7 +1102,7 @@

Source code for mne_bids.report._report

 
   

     
-      © Copyright 2017-2024, MNE Developers. Last updated on 2024-04-02.
+      © Copyright 2017-2024, MNE Developers. Last updated on 2024-04-09.
       

     
   

diff --git a/dev/_modules/mne_bids/sidecar_updates.html b/dev/_modules/mne_bids/sidecar_updates.html
index ba752bdda..9b81fcf83 100644
--- a/dev/_modules/mne_bids/sidecar_updates.html
+++ b/dev/_modules/mne_bids/sidecar_updates.html
@@ -7,7 +7,7 @@
   
     
     
-    mne_bids.sidecar_updates — MNE-BIDS 0.15.0.dev47+g598ff7f2 documentation
+    mne_bids.sidecar_updates — MNE-BIDS 0.15.0.dev48+ge8eb7a7f documentation
   
   
   
@@ -40,7 +40,7 @@
 
   
 
-    
+    
     
     
     
@@ -144,7 +144,7 @@
   
   
   
-    
MNE-BIDS 0.15.0.dev47+g598ff7f2 documentation

+    
MNE-BIDS 0.15.0.dev48+ge8eb7a7f documentation
@@ -956,7 +956,7 @@

Source code for mne_bids.sidecar_updates

 
   

     
-      © Copyright 2017-2024, MNE Developers. Last updated on 2024-04-02.
+      © Copyright 2017-2024, MNE Developers. Last updated on 2024-04-09.
       

     
   

diff --git a/dev/_modules/mne_bids/stats.html b/dev/_modules/mne_bids/stats.html
index 27d22be28..79351ed4e 100644
--- a/dev/_modules/mne_bids/stats.html
+++ b/dev/_modules/mne_bids/stats.html
@@ -7,7 +7,7 @@
   
     
     
-    mne_bids.stats — MNE-BIDS 0.15.0.dev47+g598ff7f2 documentation
+    mne_bids.stats — MNE-BIDS 0.15.0.dev48+ge8eb7a7f documentation
   
   
   
@@ -40,7 +40,7 @@
 
   
 
-    
+    
     
     
     
@@ -144,7 +144,7 @@
   
   
   
-    
MNE-BIDS 0.15.0.dev47+g598ff7f2 documentation

+    
MNE-BIDS 0.15.0.dev48+ge8eb7a7f documentation
@@ -694,7 +694,7 @@

Source code for mne_bids.stats

 
   

     
-      © Copyright 2017-2024, MNE Developers. Last updated on 2024-04-02.
+      © Copyright 2017-2024, MNE Developers. Last updated on 2024-04-09.
       

     
   

diff --git a/dev/_modules/mne_bids/utils.html b/dev/_modules/mne_bids/utils.html
index 5fc4d77c5..5f3c4a778 100644
--- a/dev/_modules/mne_bids/utils.html
+++ b/dev/_modules/mne_bids/utils.html
@@ -7,7 +7,7 @@
   
     
     
-    mne_bids.utils — MNE-BIDS 0.15.0.dev47+g598ff7f2 documentation
+    mne_bids.utils — MNE-BIDS 0.15.0.dev48+ge8eb7a7f documentation
   
   
   
@@ -40,7 +40,7 @@
 
   
 
-    
+    
     
     
     
@@ -144,7 +144,7 @@
   
   
   
-    
MNE-BIDS 0.15.0.dev47+g598ff7f2 documentation

+    
MNE-BIDS 0.15.0.dev48+ge8eb7a7f documentation
@@ -1106,7 +1106,7 @@

Source code for mne_bids.utils

 
   

     
-      © Copyright 2017-2024, MNE Developers. Last updated on 2024-04-02.
+      © Copyright 2017-2024, MNE Developers. Last updated on 2024-04-09.
       

     
   

diff --git a/dev/_modules/mne_bids/write.html b/dev/_modules/mne_bids/write.html
index a39733d1f..36a93e13c 100644
--- a/dev/_modules/mne_bids/write.html
+++ b/dev/_modules/mne_bids/write.html
@@ -7,7 +7,7 @@
   
     
     
-    mne_bids.write — MNE-BIDS 0.15.0.dev47+g598ff7f2 documentation
+    mne_bids.write — MNE-BIDS 0.15.0.dev48+ge8eb7a7f documentation
   
   
   
@@ -40,7 +40,7 @@
 
   
 
-    
+    
     
     
     
@@ -144,7 +144,7 @@
   
   
   
-    
MNE-BIDS 0.15.0.dev47+g598ff7f2 documentation

+    
MNE-BIDS 0.15.0.dev48+ge8eb7a7f documentation
@@ -3711,7 +3711,7 @@

Source code for mne_bids.write

 
   

     
-      © Copyright 2017-2024, MNE Developers. Last updated on 2024-04-02.
+      © Copyright 2017-2024, MNE Developers. Last updated on 2024-04-09.
       

     
   

diff --git a/dev/_static/documentation_options.js b/dev/_static/documentation_options.js
index ced8695dc..7ffbb8e16 100644
--- a/dev/_static/documentation_options.js
+++ b/dev/_static/documentation_options.js
@@ -1,5 +1,5 @@
 const DOCUMENTATION_OPTIONS = {
-    VERSION: '0.15.0.dev47+g598ff7f2',
+    VERSION: '0.15.0.dev48+ge8eb7a7f',
     LANGUAGE: 'en',
     COLLAPSE_INDEX: false,
     BUILDER: 'html',
diff --git a/dev/api.html b/dev/api.html
index b0cdb18e7..f20af7e1b 100644
--- a/dev/api.html
+++ b/dev/api.html
@@ -8,7 +8,7 @@
     
     
 
-    API Documentation — MNE-BIDS 0.15.0.dev47+g598ff7f2 documentation
+    API Documentation — MNE-BIDS 0.15.0.dev48+ge8eb7a7f documentation
   
   
   
@@ -41,7 +41,7 @@
 
   
 
-    
+    
     
     
     
@@ -147,7 +147,7 @@
   
   
   
-    
MNE-BIDS 0.15.0.dev47+g598ff7f2 documentation

+    
MNE-BIDS 0.15.0.dev48+ge8eb7a7f documentation
@@ -778,7 +778,7 @@

mne_bids.copyfiles - © Copyright 2017-2024, MNE Developers. Last updated on 2024-04-02. + © Copyright 2017-2024, MNE Developers. Last updated on 2024-04-09.

diff --git a/dev/authors.html b/dev/authors.html index d3770fa6c..007e5f95e 100644 --- a/dev/authors.html +++ b/dev/authors.html @@ -8,7 +8,7 @@ - <no title> — MNE-BIDS 0.15.0.dev47+g598ff7f2 documentation + <no title> — MNE-BIDS 0.15.0.dev48+ge8eb7a7f documentation @@ -41,7 +41,7 @@ - + @@ -145,7 +145,7 @@ -

MNE-BIDS 0.15.0.dev47+g598ff7f2 documentation

+

MNE-BIDS 0.15.0.dev48+ge8eb7a7f documentation

 @@ -577,7 +577,7 @@

- © Copyright 2017-2024, MNE Developers. Last updated on 2024-04-02. + © Copyright 2017-2024, MNE Developers. Last updated on 2024-04-09.

diff --git a/dev/auto_examples/anonymize_dataset.html b/dev/auto_examples/anonymize_dataset.html index ebe076cc5..0f7774b49 100644 --- a/dev/auto_examples/anonymize_dataset.html +++ b/dev/auto_examples/anonymize_dataset.html @@ -8,7 +8,7 @@ - 13. Anonymizing a BIDS dataset — MNE-BIDS 0.15.0.dev47+g598ff7f2 documentation + 13. Anonymizing a BIDS dataset — MNE-BIDS 0.15.0.dev48+ge8eb7a7f documentation @@ -41,7 +41,7 @@ - + @@ -148,7 +148,7 @@ -

MNE-BIDS 0.15.0.dev47+g598ff7f2 documentation

+

MNE-BIDS 0.15.0.dev48+ge8eb7a7f documentation

@@ -678,7 +678,7 @@

Basic anonymizationSpecifying subject IDsSpecifying subject IDsSpecifying subject IDs @@ -933,9 +933,9 @@

ReproducibilityTotal running time of the script: (0 minutes 15.376 seconds)

+

Total running time of the script: (0 minutes 11.145 seconds)

 -

Total running time of the script: (0 minutes 1.858 seconds)

+

Total running time of the script: (0 minutes 1.243 seconds)

This should be very similar to the ds000248 dataset_description.json!

-

Total running time of the script: (0 minutes 5.526 seconds)

+

Total running time of the script: (0 minutes 3.868 seconds)

-

Total running time of the script: (0 minutes 17.520 seconds)

+

Total running time of the script: (0 minutes 12.582 seconds)

 @@ -935,7 +933,7 @@

Read the dataTotal running time of the script: (0 minutes 8.353 seconds)

+

Total running time of the script: (0 minutes 7.940 seconds)