From f4bed7ad5393f5acabb897f4d5bd7601e0ef3469 Mon Sep 17 00:00:00 2001 From: Mario Muscarella Date: Sun, 19 Jan 2014 22:35:25 -0500 Subject: [PATCH] Update README.md --- README.md | 7 ++++++- 1 file changed, 6 insertions(+), 1 deletion(-) diff --git a/README.md b/README.md index d5c2266..fb0ee4b 100644 --- a/README.md +++ b/README.md @@ -1,2 +1,7 @@ -Diversity_Functions +Diversity Functions =================== + +This code is designed to help process files output from the sequence anlaysis software mothur. +The typical user will go from raw sequence data to a shared files using the program mothur. +The next steps include using the shared file to generate a taxa-by-site matrix that can be used to test hypotheses. +This code now only provides R fucntions to create taxa-by-site matrices, but also contains functions to perform basic diversity measures. This code represents the beta version of my ideas for properly analyzing microbial community data. If you would like to join the discussion, please feel free to email me.