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Re-submission of VIEWpoly (08-10-2022)

Maintainer comments

Dear CRAN Team,

This is a re-submission of VIEWpoly package. In this version (0.3.1):

  • Support for diaQTL multi-population evaluation
  • User-defined parents names in effects graphics
  • Download of plots with RData format
  • Docker image available
  • Allow to exclude haplotypes from haplotypes probability view in VIEWqtl module
  • Bug fixed to upload genome through genome link
  • Bug fixed to upload viewpoly object
  • Avoid errors if user has not internet connection
  • Inform number and ID of individuals selected by haplotypes
  • README updated to include new vignette for server version (available at brach publishing_data)

Thank you for reviewing our re-submission!

Test environments

The package passed through several checks (with the flag --as-cran) in the following systems:

  • Local (Windows 11 v10.0.22000 Build 22000)
  • Winbuilder (Windows Server 2008 R2 SP1, R-devel, 32/64 bit)
  • GitHub actions (windows-latest release)
  • Github actions (macOS-latest release)
  • Github actions (ubuntu-20.04 release)
  • Github actions (ubuntu-20.04 devel)
  • R-hub (Ubuntu Linux 20.04.1 LTS, R-release, GCC)
  • R-hub (Fedora Linux, R-devel, clang, gfortran)

R CMD check results

0 errors | 0 warnings | 1 note

There are one NOTE that appeared when running some checks. One of the directories containing example files exceeds 1Mb. It has a total of 4.5Mb. The examples are important to users explore the app features and file format before input their own data.

  • This is a new release.

Downstream dependencies

There are currently no downstream dependencies for this package.