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For ID column in the vcf file, does it mean something? For example, 1;1026680;1026780;Y;13248902;13249002;C
At the same position, different alleles are called? for example, I saw
1 1026680 1;1026680;1026780;Y;13248902;13249002;C C DEL
1 1026680 1;1026680;1026780;Y;13248902;13249002;S C DUP
Some insertions are represented as translocation?
1 18376048 1;18376049;18376162;20;32043723;32043823;C G G[20:32043723[ 13533.7018526 PASS SVTYPE=TRA GT 0|1
1 18376049 1;18376049;18376162;20;32043723;32043823;C T ]20:32043822]T 13533.7018526 PASS SVTYPE=TRA GT 0|1
Thanks.
George
The text was updated successfully, but these errors were encountered:
Hi there,
I have some simple qquestions:
1;1026680;1026780;Y;13248902;13249002;C
1 1026680 1;1026680;1026780;Y;13248902;13249002;C C DEL
1 1026680 1;1026680;1026780;Y;13248902;13249002;S C DUP
1 18376048 1;18376049;18376162;20;32043723;32043823;C G G[20:32043723[ 13533.7018526 PASS SVTYPE=TRA GT 0|1
1 18376049 1;18376049;18376162;20;32043723;32043823;C T ]20:32043822]T 13533.7018526 PASS SVTYPE=TRA GT 0|1
Thanks.
George
The text was updated successfully, but these errors were encountered: