diff --git a/cmake/onnxruntime_python.cmake b/cmake/onnxruntime_python.cmake
index 345ef2b504aa4..b93ccf77d52a2 100644
--- a/cmake/onnxruntime_python.cmake
+++ b/cmake/onnxruntime_python.cmake
@@ -453,6 +453,9 @@ file(GLOB onnxruntime_python_quantization_operators_src CONFIGURE_DEPENDS
 file(GLOB onnxruntime_python_quantization_cal_table_flatbuffers_src CONFIGURE_DEPENDS
     "${ONNXRUNTIME_ROOT}/python/tools/quantization/CalTableFlatBuffers/*.py"
 )
+file(GLOB onnxruntime_python_quantization_ep_qnn_src CONFIGURE_DEPENDS
+    "${ONNXRUNTIME_ROOT}/python/tools/quantization/execution_providers/qnn/*.py"
+)
 file(GLOB onnxruntime_python_transformers_src CONFIGURE_DEPENDS
     "${ONNXRUNTIME_ROOT}/python/tools/transformers/*.py"
 )
@@ -547,6 +550,8 @@ add_custom_command(
   COMMAND ${CMAKE_COMMAND} -E make_directory $<TARGET_FILE_DIR:${build_output_target}>/onnxruntime/quantization
   COMMAND ${CMAKE_COMMAND} -E make_directory $<TARGET_FILE_DIR:${build_output_target}>/onnxruntime/quantization/operators
   COMMAND ${CMAKE_COMMAND} -E make_directory $<TARGET_FILE_DIR:${build_output_target}>/onnxruntime/quantization/CalTableFlatBuffers
+  COMMAND ${CMAKE_COMMAND} -E make_directory $<TARGET_FILE_DIR:${build_output_target}>/onnxruntime/quantization/execution_providers
+  COMMAND ${CMAKE_COMMAND} -E make_directory $<TARGET_FILE_DIR:${build_output_target}>/onnxruntime/quantization/execution_providers/qnn
   COMMAND ${CMAKE_COMMAND} -E make_directory $<TARGET_FILE_DIR:${build_output_target}>/quantization
   COMMAND ${CMAKE_COMMAND} -E make_directory $<TARGET_FILE_DIR:${build_output_target}>/transformers
   COMMAND ${CMAKE_COMMAND} -E make_directory $<TARGET_FILE_DIR:${build_output_target}>/transformers/test_data/models
@@ -617,6 +622,9 @@ add_custom_command(
   COMMAND ${CMAKE_COMMAND} -E copy
       ${onnxruntime_python_quantization_cal_table_flatbuffers_src}
       $<TARGET_FILE_DIR:${build_output_target}>/onnxruntime/quantization/CalTableFlatBuffers/
+  COMMAND ${CMAKE_COMMAND} -E copy
+      ${onnxruntime_python_quantization_ep_qnn_src}
+      $<TARGET_FILE_DIR:${build_output_target}>/onnxruntime/quantization/execution_providers/qnn/
   COMMAND ${CMAKE_COMMAND} -E copy
       ${onnxruntime_python_transformers_src}
       $<TARGET_FILE_DIR:${build_output_target}>/onnxruntime/transformers/
diff --git a/setup.py b/setup.py
index 798c8c4b2895b..2ede39915cc8d 100644
--- a/setup.py
+++ b/setup.py
@@ -408,6 +408,7 @@ def finalize_options(self):
     "onnxruntime.quantization",
     "onnxruntime.quantization.operators",
     "onnxruntime.quantization.CalTableFlatBuffers",
+    "onnxruntime.quantization.execution_providers.qnn",
     "onnxruntime.transformers",
     "onnxruntime.transformers.models.bart",
     "onnxruntime.transformers.models.bert",