From 1574bc7017a4d90ac1bf8234d0e6a393cc2a8568 Mon Sep 17 00:00:00 2001 From: "github-actions[bot]" <41898282+github-actions[bot]@users.noreply.github.com> Date: Thu, 14 Dec 2023 20:28:12 +0000 Subject: [PATCH] Publish mmstudio/latest --- .github/workflows/publish.yml | 6 ++ deprecated-list.html | 28 +++++----- org/micromanager/class-use/PropertyMap.html | 56 +++++++++---------- org/micromanager/data/class-use/Coords.html | 16 +++--- .../data/class-use/Datastore.html | 16 +++--- org/micromanager/data/class-use/Image.html | 18 +++--- .../data/class-use/SummaryMetadata.html | 22 ++++---- .../display/class-use/DisplaySettings.html | 4 +- .../overlay/class-use/OverlayListener.html | 8 +-- org/micromanager/display/package-tree.html | 2 +- overview-tree.html | 4 +- 11 files changed, 93 insertions(+), 87 deletions(-) diff --git a/.github/workflows/publish.yml b/.github/workflows/publish.yml index 64fe46a..cbc44ec 100644 --- a/.github/workflows/publish.yml +++ b/.github/workflows/publish.yml @@ -8,6 +8,12 @@ on: branches: - 'pages/**' +concurrency: + # Prevent overlapping runs of this workflow, which would cause a race on the + # gh-pages branch. + group: publish-to-gh-pages + cancel-in-progress: false + jobs: update-html: name: Update docs for project/version diff --git a/deprecated-list.html b/deprecated-list.html index 4a89845..efdb890 100644 --- a/deprecated-list.html +++ b/deprecated-list.html @@ -186,13 +186,13 @@

Contents

-org.micromanager.acquisition.ChannelSpec.channelGroup -
Use Builder and getters instead
+org.micromanager.acquisition.SequenceSettings.channelGroup +
use Builder and channelGroup() instead
-org.micromanager.acquisition.SequenceSettings.channelGroup -
use Builder and channelGroup() instead
+org.micromanager.acquisition.ChannelSpec.channelGroup +
Use Builder and getters instead
@@ -407,14 +407,16 @@

Contents

org.micromanager.PropertyMap.copy() -org.micromanager.display.DisplaySettings.copy() - - org.micromanager.acquisition.SequenceSettings.copy()
When used correctly, SequenceSettings are immutable. If you really need a copy, use copyBuilder().build();
+ +org.micromanager.data.Coords.copy() +
Use copyBuilder instead
+ + org.micromanager.data.Metadata.copy()
Use the appropriate of the following: @@ -429,9 +431,7 @@

Contents

-org.micromanager.data.Coords.copy() -
Use copyBuilder instead
- +org.micromanager.display.DisplaySettings.copy() org.micromanager.data.DataManager.createCoords(String) @@ -722,13 +722,13 @@

Contents

org.micromanager.PropertyMap.getPropertyMap(String) -org.micromanager.display.DisplayManager.getPropertyMapBuilder() -
Use PropertyMaps.builder() instead
+org.micromanager.data.DataManager.getPropertyMapBuilder() +
Use PropertyMaps.builder() instead
-org.micromanager.data.DataManager.getPropertyMapBuilder() -
Use PropertyMaps.builder() instead
+org.micromanager.display.DisplayManager.getPropertyMapBuilder() +
Use PropertyMaps.builder() instead
diff --git a/org/micromanager/class-use/PropertyMap.html b/org/micromanager/class-use/PropertyMap.html index 6f67852..fd0f061 100644 --- a/org/micromanager/class-use/PropertyMap.html +++ b/org/micromanager/class-use/PropertyMap.html @@ -140,29 +140,29 @@

Uses of -static PropertyMap -PropertyMaps.emptyPropertyMap() -
Return the empty property map.
- - - PropertyMap PropertyManager.emptyPropertyMap()
Returns an empty property map.
- + static PropertyMap -PropertyMaps.fromJSON(java.lang.String json) -
Create a property map from its JSON-serialized form.
+PropertyMaps.emptyPropertyMap() +
Return the empty property map.
- + PropertyMap PropertyManager.fromJSON(java.lang.String json)
Creates a property map from its JSON-serialized form.
+ +static PropertyMap +PropertyMaps.fromJSON(java.lang.String json) +
Create a property map from its JSON-serialized form.
+ + PropertyMap PropertyMap.getPropertyMap(java.lang.String key) @@ -175,14 +175,14 @@

Uses of PropertyMap aDefault)  -static PropertyMap -PropertyMaps.loadJSON(java.io.File file) +PropertyMap +PropertyManager.loadJSON(java.io.File file)
Create a property map from its JSON-serialized form stored in a file.
-PropertyMap -PropertyManager.loadJSON(java.io.File file) +static PropertyMap +PropertyMaps.loadJSON(java.io.File file)
Create a property map from its JSON-serialized form stored in a file.
@@ -194,8 +194,8 @@

Uses of PropertyMap -StagePosition.toPropertyMap() -
Returns this StagePosition instance as a PropertyMap.
+PositionList.toPropertyMap() +
Creates a PropertyMap from this PositionList.
@@ -206,8 +206,8 @@

Uses of PropertyMap -PositionList.toPropertyMap() -
Creates a PropertyMap from this PositionList.
+StagePosition.toPropertyMap() +
Returns this StagePosition instance as a PropertyMap.
@@ -239,17 +239,17 @@

Uses of -static StagePosition -StagePosition.fromPropertyMap(PropertyMap pmap) -
Returns the given PrropertyMap as a StagePosition.
- - - static MultiStagePosition MultiStagePosition.fromPropertyMap(PropertyMap pmap)
Generates a multistagePosition from the given PropertyMap.
+ +static StagePosition +StagePosition.fromPropertyMap(PropertyMap pmap) +
Returns the given PrropertyMap as a StagePosition.
+ + PropertyMap PropertyMap.getPropertyMap(java.lang.String key, @@ -468,13 +468,13 @@

Uses of PropertyMap -Overlay.getConfiguration() +AbstractOverlay.getConfiguration()
Return the user-customizable settings for this overlay.
PropertyMap -AbstractOverlay.getConfiguration() +Overlay.getConfiguration()
Return the user-customizable settings for this overlay.
@@ -489,13 +489,13 @@

Uses of void -Overlay.setConfiguration(PropertyMap config) +AbstractOverlay.setConfiguration(PropertyMap config)
Configure the overlay with the given parameters.
void -AbstractOverlay.setConfiguration(PropertyMap config) +Overlay.setConfiguration(PropertyMap config)
Configure the overlay with the given parameters.
diff --git a/org/micromanager/data/class-use/Coords.html b/org/micromanager/data/class-use/Coords.html index d850c62..fae88d8 100644 --- a/org/micromanager/data/class-use/Coords.html +++ b/org/micromanager/data/class-use/Coords.html @@ -147,14 +147,14 @@

Uses of Coords -Image.getCoords() -
Retrieve the Coords of this Image.
+DataProviderHasNewImageEvent.getCoords() +
Returns Coords for the image.
Coords -DataProviderHasNewImageEvent.getCoords() -
Returns Coords for the image.
+Image.getCoords() +
Retrieve the Coords of this Image.
@@ -390,14 +390,14 @@

Uses of Coords -DisplayPositionChangedEvent.getDisplayPosition() -
returns the new display position.
+DataViewer.getDisplayPosition() +
Get the coordinates for the currently displayed images.
Coords -DataViewer.getDisplayPosition() -
Get the coordinates for the currently displayed images.
+DisplayPositionChangedEvent.getDisplayPosition() +
returns the new display position.
diff --git a/org/micromanager/data/class-use/Datastore.html b/org/micromanager/data/class-use/Datastore.html index caaef53..64d94a7 100644 --- a/org/micromanager/data/class-use/Datastore.html +++ b/org/micromanager/data/class-use/Datastore.html @@ -268,21 +268,22 @@

Uses of Datastore -Pipeline.getDatastore() -
Get the output Datastore for this Pipeline.
+DatastoreClosingEvent.getDatastore() +
Returns the Datastore that is closing.
Datastore -ImageOverwrittenEvent.getDatastore() +ImageDeletedEvent.getDatastore()
Provides the Datastore this image was added to; potentially useful for code that listens to events from multiple Datastores.
Datastore -DatastoreClosingEvent.getDatastore() -
Returns the Datastore that is closing.
+ImageOverwrittenEvent.getDatastore() +
Provides the Datastore this image was added to; potentially useful for + code that listens to events from multiple Datastores.
@@ -293,9 +294,8 @@

Uses of Datastore -ImageDeletedEvent.getDatastore() -
Provides the Datastore this image was added to; potentially useful for - code that listens to events from multiple Datastores.
+Pipeline.getDatastore() +
Get the output Datastore for this Pipeline.
diff --git a/org/micromanager/data/class-use/Image.html b/org/micromanager/data/class-use/Image.html index 147b60d..044b3e5 100644 --- a/org/micromanager/data/class-use/Image.html +++ b/org/micromanager/data/class-use/Image.html @@ -424,8 +424,9 @@

Uses of void -RewritableDatastore.putImage(Image image) -
Insert an image into the Datastore.
+Storage.putImage(Image image) +
Insert an Image into the Storage, so that it may be returned by later + getImage() calls.
@@ -436,9 +437,8 @@

Uses of void -Storage.putImage(Image image) -
Insert an Image into the Storage, so that it may be returned by later - getImage() calls.
+RewritableDatastore.putImage(Image image) +
Insert an image into the Datastore.
@@ -514,7 +514,7 @@

Uses of void -Overlay.paintOverlay(java.awt.Graphics2D graphicsContext, +AbstractOverlay.paintOverlay(java.awt.Graphics2D graphicsContext, java.awt.Rectangle screenRect, DisplaySettings displaySettings, java.util.List<Image> images, @@ -525,7 +525,7 @@

Uses of void -AbstractOverlay.paintOverlay(java.awt.Graphics2D graphicsContext, +Overlay.paintOverlay(java.awt.Graphics2D graphicsContext, java.awt.Rectangle screenRect, DisplaySettings displaySettings, java.util.List<Image> images, @@ -545,7 +545,7 @@

Uses of void -Overlay.paintOverlay(java.awt.Graphics2D graphicsContext, +AbstractOverlay.paintOverlay(java.awt.Graphics2D graphicsContext, java.awt.Rectangle screenRect, DisplaySettings displaySettings, java.util.List<Image> images, @@ -556,7 +556,7 @@

Uses of void -AbstractOverlay.paintOverlay(java.awt.Graphics2D graphicsContext, +Overlay.paintOverlay(java.awt.Graphics2D graphicsContext, java.awt.Rectangle screenRect, DisplaySettings displaySettings, java.util.List<Image> images, diff --git a/org/micromanager/data/class-use/SummaryMetadata.html b/org/micromanager/data/class-use/SummaryMetadata.html index d505608..e4cdffb 100644 --- a/org/micromanager/data/class-use/SummaryMetadata.html +++ b/org/micromanager/data/class-use/SummaryMetadata.html @@ -140,27 +140,27 @@

Uses of SummaryMetadata -DataProviderHasNewSummaryMetadataEvent.getSummaryMetadata() -
Returns Summary Metadata.
+Storage.getSummaryMetadata() +
Retrieve the SummaryMetadata associated with this dataset.
SummaryMetadata -Storage.getSummaryMetadata() -
Retrieve the SummaryMetadata associated with this dataset.
+DataProvider.getSummaryMetadata() +
Returns Summary Metadata.
SummaryMetadata -ProcessorContext.getSummaryMetadata() -
Access the SummaryMetadata of the Datastore that images will ultimately - be inserted into.
+DataProviderHasNewSummaryMetadataEvent.getSummaryMetadata() +
Returns Summary Metadata.
SummaryMetadata -DataProvider.getSummaryMetadata() -
Returns Summary Metadata.
+ProcessorContext.getSummaryMetadata() +
Access the SummaryMetadata of the Datastore that images will ultimately + be inserted into.
@@ -195,13 +195,13 @@

Uses of void -RewritableDatastore.setSummaryMetadata(SummaryMetadata metadata) +Datastore.setSummaryMetadata(SummaryMetadata metadata)
Set the SummaryMetadata.
void -Datastore.setSummaryMetadata(SummaryMetadata metadata) +RewritableDatastore.setSummaryMetadata(SummaryMetadata metadata)
Set the SummaryMetadata.
diff --git a/org/micromanager/display/class-use/DisplaySettings.html b/org/micromanager/display/class-use/DisplaySettings.html index 9987cfe..bbd546f 100644 --- a/org/micromanager/display/class-use/DisplaySettings.html +++ b/org/micromanager/display/class-use/DisplaySettings.html @@ -226,7 +226,7 @@

Uses of void -Overlay.paintOverlay(java.awt.Graphics2D graphicsContext, +AbstractOverlay.paintOverlay(java.awt.Graphics2D graphicsContext, java.awt.Rectangle screenRect, DisplaySettings displaySettings, java.util.List<Image> images, @@ -237,7 +237,7 @@

Uses of void -AbstractOverlay.paintOverlay(java.awt.Graphics2D graphicsContext, +Overlay.paintOverlay(java.awt.Graphics2D graphicsContext, java.awt.Rectangle screenRect, DisplaySettings displaySettings, java.util.List<Image> images, diff --git a/org/micromanager/display/overlay/class-use/OverlayListener.html b/org/micromanager/display/overlay/class-use/OverlayListener.html index ddb4fe2..8b111bf 100644 --- a/org/micromanager/display/overlay/class-use/OverlayListener.html +++ b/org/micromanager/display/overlay/class-use/OverlayListener.html @@ -103,25 +103,25 @@

Uses of void -Overlay.addOverlayListener(OverlayListener listener) +AbstractOverlay.addOverlayListener(OverlayListener listener)
Add a listener.
void -AbstractOverlay.addOverlayListener(OverlayListener listener) +Overlay.addOverlayListener(OverlayListener listener)
Add a listener.
void -Overlay.removeOverlayListener(OverlayListener listener) +AbstractOverlay.removeOverlayListener(OverlayListener listener)
Remove a listener.
void -AbstractOverlay.removeOverlayListener(OverlayListener listener) +Overlay.removeOverlayListener(OverlayListener listener)
Remove a listener.
diff --git a/org/micromanager/display/package-tree.html b/org/micromanager/display/package-tree.html index f9d88bd..068394a 100644 --- a/org/micromanager/display/package-tree.html +++ b/org/micromanager/display/package-tree.html @@ -147,8 +147,8 @@

Enum Hierarchy

diff --git a/overview-tree.html b/overview-tree.html index 95fed06..a91ada0 100644 --- a/overview-tree.html +++ b/overview-tree.html @@ -370,9 +370,9 @@

Enum Hierarchy

  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)