From e9609db7b2b423fd31223deedea72b3354f42f9e Mon Sep 17 00:00:00 2001
From: Brandon <brandon@asiimaging.com>
Date: Fri, 29 Sep 2023 15:57:27 -0700
Subject: [PATCH] add single axis panel back to setup panel

---
 .../gui/tabs/setup/SetupPanel.java            |  2 +-
 .../gui/tabs/setup/SingleAxisPanel.java       | 31 ++++++++++++-------
 .../model/acquisitions/AcquisitionEngine.java |  1 +
 3 files changed, 22 insertions(+), 12 deletions(-)

diff --git a/src/main/java/org/micromanager/lightsheetmanager/gui/tabs/setup/SetupPanel.java b/src/main/java/org/micromanager/lightsheetmanager/gui/tabs/setup/SetupPanel.java
index 1a3ab5b..50847b1 100644
--- a/src/main/java/org/micromanager/lightsheetmanager/gui/tabs/setup/SetupPanel.java
+++ b/src/main/java/org/micromanager/lightsheetmanager/gui/tabs/setup/SetupPanel.java
@@ -52,7 +52,7 @@ public SetupPanel(final LightSheetManagerModel model, final int pathNum) {
         leftPanel_.add(excitationPanel_, "growx, wrap");
         if (model_.devices().getDeviceAdapter().getMicroscopeGeometry() == GeometryType.SCAPE) {
             singleAxisPanel_ = new SingleAxisPanel(model_);
-            //leftPanel_.add(singleAxisPanel_, "growx, wrap");
+            leftPanel_.add(singleAxisPanel_, "growx, wrap");
         }
         leftPanel_.add(cameraPanel_, "growx, wrap");
 
diff --git a/src/main/java/org/micromanager/lightsheetmanager/gui/tabs/setup/SingleAxisPanel.java b/src/main/java/org/micromanager/lightsheetmanager/gui/tabs/setup/SingleAxisPanel.java
index 688ac98..fe8b6d9 100644
--- a/src/main/java/org/micromanager/lightsheetmanager/gui/tabs/setup/SingleAxisPanel.java
+++ b/src/main/java/org/micromanager/lightsheetmanager/gui/tabs/setup/SingleAxisPanel.java
@@ -40,36 +40,45 @@ private void createUserInterface() {
         final JLabel lblAmplitude = new JLabel("Amplitude");
         final JLabel lblPeriod = new JLabel("Period");
 
-        // scanner.sa().getPatternY().toString()
+
         final String[] patterns = SingleAxis.Pattern.toArray();
-        cbxPattern_ = new ComboBox(patterns,
-                patterns[0], 100, 24);
 
-        spnAmplitude_ = Spinner.createDoubleSpinner(0.0, 0.0, 100.0, 1.0);
-        spnPeriod_ = Spinner.createIntegerSpinner(0, 0, 100, 1);
+        String pattern = patterns[0];
+        double amplitudeY = 0;
+        int periodY = 0;
+        if (scanner != null) {
+            pattern = scanner.sa().getPatternY().toString();
+            amplitudeY = (float)scanner.sa().getAmplitudeY();
+            periodY = scanner.sa().getPeriodY();
+        }
+
+        cbxPattern_ = new ComboBox(patterns, pattern, 100, 24);
+
+        spnAmplitude_ = Spinner.createDoubleSpinner(amplitudeY, 0.0, 100.0, 1.0);
+        spnPeriod_ = Spinner.createIntegerSpinner(periodY, 0, 100, 1);
 
         add(lblPattern, "");
         add(cbxPattern_, "wrap");
         add(lblAmplitude, "");
         add(spnAmplitude_, "wrap");
         add(lblPeriod, "");
-            add(spnPeriod_, "");
+        add(spnPeriod_, "");
     }
 
     private void createEventHandlers() {
-//            final ASIScanner galvo = model_.devices()
-//                    .getDevice("IllumSlice");
+            final ASIScanner galvo = model_.devices()
+                    .getDevice("IllumSlice");
 
         cbxPattern_.registerListener(e -> {
-            //galvo.sa().setPatternY(SingleAxis.Pattern.fromString(cbxPattern_.getSelected()));
+            galvo.sa().setPatternY(SingleAxis.Pattern.fromString(cbxPattern_.getSelected()));
         });
 
         spnAmplitude_.registerListener(e -> {
-            //galvo.sa().setAmplitudeY(spnAmplitude_.getFloat());
+            galvo.sa().setAmplitudeY(spnAmplitude_.getFloat());
         });
 
         spnPeriod_.registerListener(e -> {
-            //galvo.sa().setPeriodY(spnPeriod_.getInt());
+            galvo.sa().setPeriodY(spnPeriod_.getInt());
         });
 
     }
diff --git a/src/main/java/org/micromanager/lightsheetmanager/model/acquisitions/AcquisitionEngine.java b/src/main/java/org/micromanager/lightsheetmanager/model/acquisitions/AcquisitionEngine.java
index 9864638..c8b57fa 100644
--- a/src/main/java/org/micromanager/lightsheetmanager/model/acquisitions/AcquisitionEngine.java
+++ b/src/main/java/org/micromanager/lightsheetmanager/model/acquisitions/AcquisitionEngine.java
@@ -636,6 +636,7 @@ public void close() {
                 studio_.logs().logMessage("started position polling after acquisition");
                 frame_.getNavigationPanel().startPolling();
             }
+
         }
     }