Skip to content

Latest commit

 

History

History
208 lines (145 loc) · 5.47 KB

CHANGES.rst

File metadata and controls

208 lines (145 loc) · 5.47 KB
Raw

0.3.4 (February 22, 2018)

  • [ENH] Remove extensions from the nifti header (#226)
  • [FIX] Fixing conda version (#227)
  • [TST] Speed-up long tests (#225)
  • [TST] Migrate to CircleCI 2.0 (#224)

Version 0.3.3

Version 0.3.1

Version 0.3.0

  • [PIN] Nipype 1.0.0

Version 0.2.8

Version 0.2.7

Version 0.2.6

Version 0.2.5

Version 0.2.4

Version 0.2.3

  • [PIN] Upgrade internal Nipype to current master + current nipy/nipype#2325
  • [ENH] Thinner lines in tissue segmentation (#215)
  • [ENH] Use nearest for coreg visualization (#214)

Version 0.2.2

Version 0.2.1

  • [ENH] Add new ROIsPlot interface (#211)
  • [PIN] Upgrade internal Nipype to current master.

Version 0.2.0

  • [ENH] Generate SVGs only (#210)
  • [PIN] Upgrade internal Nipype to master after the v0.14.0 release.

Version 0.1.11 =============-

  • [ENH] Update internal Nipype including merging nipy/nipype#2285 before nipype itself does.

Version 0.1.10 =============-

  • [ENH] Lower priority of "Affines do not match" warning (#209)
  • [FIX] Increase tolerance in GenerateSamplingReference (#207)
  • [ENH] Upgrade internal Nipype

Version 0.1.9

  • [ENH] Display surface contours for MRICoregRPT if available (#204)
  • [ENH] Crop BOLD sampling reference to reduce output file size (#205)
  • [ENH] Close file descriptors where possible to avoid OS limits (#208)
  • [ENH] Upgrade internal Nipype

Version 0.1.8

  • [ENH] Add NKI template data grabber (#200)
  • [ENH] Enable sbref to be passed to EstimateReferenceImage (#199)
  • [ENH] Add utilities for fixing NIfTI qform/sform matrices (#202)
  • [ENH] Upgrade internal Nipype

Version 0.1.7

  • [ENH] Reporting interface for mri_coreg
  • [ENH] Upgrade internal Nipype

Version 0.1.6

  • [ENH] Add BIDS example getters (#189)
  • [ENH] Add NormalizeMotionParams interface (#190)
  • [ENH] Add ICA-AROMA reporting interface (#193)
  • [FIX] Correctly handle temporal units in MELODIC plotting (#192)
  • [ENH] Upgrade internal Nipype

Version 0.1.5

  • [ENH] Do not enforce float precision for ANTs (#187)
  • [ENH] Clear header extensions when making ref image (#188)
  • [ENH] Upgrade internal Nipype

Version 0.1.4

  • [ENH] Upgrade internal Nipype

Version 0.1.3

  • [ENH] Upgrade internal Nipype

Version 0.1.2

  • Hotfix release (updated manifest)

Version 0.1.1

  • Hotfix release (updated manifest)

Version 0.1.0

  • [ENH] Improve dependency management for users unable to use Docker/Singularity containers (#174)
  • [DEP] Removed RobustMNINormalization testing input; use flavor='testing' instead (#172)

Version 0.0.7

  • [ENH] Use AffineInitializer in RobustMNIRegistration (#169, #171)
  • [ENH] Add CopyHeader interface (#168)
  • [ENH] Add 3dUnifize to skull-stripping workflow (#167, #170)
  • [ENH] Give access to num_threads in N4BiasFieldCorrection (#166)
  • [ENH] Add a simple interface for visualising masks (#161)
  • [ENH] Add a family of faster registration settings (#157)
  • [ENH] More flexible settings for RobustMNIRegistration (#155)
  • [ENH] Add EstimateReferenceImage interface (#148)
  • [ENH] Add a SimpleBeforeAfter report capable interface (#144)
  • [ENH] Add MELODIC report interface (#134)

Version 0.0.6

  • [FIX] Python 2.7 issues and testing (#130, #135)
  • [ENH] Compress surface segmentation reports (#133)
  • [ENH] Write bias image in skull-stripping workflow (#131)
  • [FIX] BBRegisterRPT: Use inputs.subjects_dir to find structurals (#128)
  • [ENH] Fetch full 2009c from OSF (#126)
  • [ENH] Coregistration tweaks (#125)
  • [FIX] Be more robust in detecting SVGO (#124)
  • [ENH] Enable Lanczos interpolation (#122)

Version 0.0.5

Version 0.0.3

  • Add parcellation derived from Harvard-Oxford template, to be used with the nonlinear-asym-09c template for the carpetplot
  • Add headmask and normalize tpms in mni_icbm152_nlin_asym_09c
  • Update MNI ICBM152 templates (linear and nonlinear-asym)
  • Add MNI152 2009c nonlinear-symetric template (LAS)
  • Add MNI152 nonlinear-symmetric template
  • Add MNI EPI template and parcellation
  • Switch data downloads from GDrive to OSF
  • Fixed installer, now compatible with python 3

Version 0.0.2

  • Added MRI reorient workflow (based on AFNI)

Version 0.0.1

  • Added skull-stripping workflow based on AFNI
  • Rewritten most of the shablona-derived names and description files
  • Copied project structure from Shablona