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gmetry.f
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SUBROUTINE GMETRY(GEO,COORD)
IMPLICIT DOUBLE PRECISION (A-H,O-Z)
INCLUDE 'SIZES'
COMMON /GEOKST/ NATOMS,LABELS(NUMATM),
1NA(NUMATM),NB(NUMATM),NC(NUMATM)
2 /EULER / TVEC(3,3), ID
COMMON /REACTN/ STEP, GEOA(3,NUMATM), GEOVEC(3,NUMATM),COLCST
COMMON /GEOOK/ IGEOOK
COMMON /NUMCAL/ NUMCAL
DIMENSION GEO(3,NUMATM),COORD(3,NUMATM)
CHARACTER *15 NDIMEN(4)
LOGICAL GEOOK
SAVE ICALCN, NDIMEN, GEOOK
DATA ICALCN/0/
DATA NDIMEN/' MOLECULE ',' POLYMER ',
1'LAYER STRUCTURE',' SOLID '/
C***********************************************************************
C
C GMETRY COMPUTES COORDINATES FROM BOND-ANGLES AND LENGTHS.
C *** IT IS ADAPTED FROM THE PROGRAM WRITTEN BY M.J.S. DEWAR.
C
C THREE SEPARATE OPTIONS EXIST WITHIN GMETRY. THESE ARE:
C (A) IF NA(1) IS EQUAL TO 99 (IMPOSSIBLE UNDER NORMAL CIRCUMSTANCES)
C THEN GEO IS ASSUMED TO BE IN CARTESIAN RATHER THAN INTERNAL
C COORDINATES, AND COORD IS THEN SET EQUAL TO GEO.
C (B) IF STEP IS NON-ZERO (THIS IS THE CASE WHEN "SADDLE" IS USED)
C THEN GEO IS FIRST MODIFIED BY SHIFTING THE INTERNAL COORDINATES
C ALONG A RADIUS FROM GEOA TO PLACE GEO AT ADISTANCESTEPFROMGEOA.
C (C) NORMAL CONVERSION FROM INTERNAL TO CARTESIAN COORDINATESISDONE.
C
C ON INPUT:
C GEO = ARRAY OF INTERNAL COORDINATES.
C NATOMS = NUMBER OF ATOMS, INCLUDING DUMMIES.
C NA = ARRAY OF ATOM LABELS FOR BOND LENGTHS.
C
C ON OUTPUT:
C COORD = ARRAY OF CARTESIAN COORDINATES
C
C***********************************************************************
C OPTION (B)
GEOOK=(IGEOOK.EQ.99)
IF(ABS(STEP) .GT. 1.D-4) THEN
SUM=0.D0
DO 10 J=1,3
C$DOIT VBEST
DO 10 I=1,NATOMS
GEOVEC(J,I)=GEO(J,I)-GEOA(J,I)
10 SUM=SUM+GEOVEC(J,I)**2
SUM=SQRT(SUM)
ERROR=(SUM-STEP)/SUM
ELSE
ERROR=0.D0
ENDIF
DO 20 J=1,3
C$DOIT VBEST
DO 20 I=1,NATOMS
20 GEO(J,I)=GEO(J,I)-ERROR*GEOVEC(J,I)
C OPTION (A)
IF(NA(1).EQ.99) THEN
DO 30 I=1,3
C$DOIT VBEST
DO 30 J=1,NATOMS
30 COORD(I,J)=GEO(I,J)
GOTO 100
ENDIF
C OPTION (C)
COORD(1,1)=0.0D00
COORD(2,1)=0.0D00
COORD(3,1)=0.0D00
COORD(1,2)=GEO(1,2)
COORD(2,2)=0.0D00
COORD(3,2)=0.0D00
IF(NATOMS.EQ.2) GOTO 100
CCOS=COS(GEO(2,3))
IF(NA(3).EQ.1)THEN
COORD(1,3)=COORD(1,1)+GEO(1,3)*CCOS
ELSE
COORD(1,3)=COORD(1,2)-GEO(1,3)*CCOS
ENDIF
COORD(2,3)=GEO(1,3)*SIN(GEO(2,3))
COORD(3,3)=0.0D00
DO 90 I=4,NATOMS
COSA=COS(GEO(2,I))
MB=NB(I)
MC=NA(I)
XB=COORD(1,MB)-COORD(1,MC)
YB=COORD(2,MB)-COORD(2,MC)
ZB=COORD(3,MB)-COORD(3,MC)
RBC=XB*XB+YB*YB+ZB*ZB
IF(RBC.LT.1.D-16)THEN
C
C TWO ATOMS ARE COINCIDENT. A FATAL ERROR.
C
WRITE(6,'(A,I4,A,I4,A)')' ATOMS',MB,' AND',MC,' ARE COINCIDE
1NT'
WRITE(6,'(A)')' THIS IS A FATAL ERROR, RUN STOPPED IN GMETRY
1'
STOP
ELSE
RBC=1.0D00/SQRT(RBC)
ENDIF
MA=NC(I)
XA=COORD(1,MA)-COORD(1,MC)
YA=COORD(2,MA)-COORD(2,MC)
ZA=COORD(3,MA)-COORD(3,MC)
C
C ROTATE ABOUT THE Z-AXIS TO MAKE YB=0, AND XB POSITIVE. IF XYB IS
C TOO SMALL, FIRST ROTATE THE Y-AXIS BY 90 DEGREES.
C
XYB=SQRT(XB*XB+YB*YB)
K=-1
IF (XYB.GT.0.1D00) GO TO 40
XPA=ZA
ZA=-XA
XA=XPA
XPB=ZB
ZB=-XB
XB=XPB
XYB=SQRT(XB*XB+YB*YB)
K=+1
C
C ROTATE ABOUT THE Y-AXIS TO MAKE ZB VANISH
C
40 COSTH=XB/XYB
SINTH=YB/XYB
XPA=XA*COSTH+YA*SINTH
YPA=YA*COSTH-XA*SINTH
SINPH=ZB*RBC
COSPH=SQRT(ABS(1.D00-SINPH*SINPH))
ZQA=ZA*COSPH-XPA*SINPH
C
C ROTATE ABOUT THE X-AXIS TO MAKE ZA=0, AND YA POSITIVE.
C
YZA=SQRT(YPA**2+ZQA**2)
IF(YZA.LT.1.D-4)GOTO 60
IF(YZA.LT.2.D-2 .AND. .NOT.GEOOK)THEN
WRITE(6,'(//20X,'' CALCULATION ABANDONED AT THIS POINT'')')
WRITE(6,'(//10X,'' THREE ATOMS BEING USED TO DEFINE THE'',/
110X,'' COORDINATES OF A FOURTH ATOM, WHOSE BOND-ANGLE IS'')')
WRITE(6,'(10X,'' NOT ZERO OR 180 DEGREEES, ARE '',
1''IN AN ALMOST STRAIGHT'')')
WRITE(6,'(10X,'' LINE. THERE IS A HIGH PROBABILITY THAT THE
1'',/10X,'' COORDINATES OF THE ATOM WILL BE INCORRECT.'')')
WRITE(6,'(//20X,''THE FAULTY ATOM IS ATOM NUMBER'',I4)')I
CALL GEOUT(1)
WRITE(6,'(//20X,''CARTESIAN COORDINATES UP TO FAULTY ATOM'')
1')
WRITE(6,'(//5X,''I'',12X,''X'',12X,''Y'',12X,''Z'')')
DO 50 J=1,I
50 WRITE(6,'(I6,F16.5,2F13.5)')J,(COORD(K,J),K=1,3)
WRITE(6,'(//6X,'' ATOMS'',I3,'','',I3,'', AND'',I3,
1'' ARE WITHIN'',F7.4,'' ANGSTROMS OF A STRAIGHT LINE'')')
2MC,MB,MA,YZA
STOP
ENDIF
COSKH=YPA/YZA
SINKH=ZQA/YZA
GOTO 70
60 CONTINUE
C
C ANGLE TOO SMALL TO BE IMPORTANT
C
COSKH=1.D0
SINKH=0.D0
70 CONTINUE
C
C COORDINATES :- A=(???,YZA,0), B=(RBC,0,0), C=(0,0,0)
C NONE ARE NEGATIVE.
C THE COORDINATES OF I ARE EVALUATED IN THE NEW FRAME.
C
SINA=SIN(GEO(2,I))
SIND=-SIN(GEO(3,I))
COSD=COS(GEO(3,I))
XD=GEO(1,I)*COSA
YD=GEO(1,I)*SINA*COSD
ZD=GEO(1,I)*SINA*SIND
C
C TRANSFORM THE COORDINATES BACK TO THE ORIGINAL SYSTEM.
C
YPD=YD*COSKH-ZD*SINKH
ZPD=ZD*COSKH+YD*SINKH
XPD=XD*COSPH-ZPD*SINPH
ZQD=ZPD*COSPH+XD*SINPH
XQD=XPD*COSTH-YPD*SINTH
YQD=YPD*COSTH+XPD*SINTH
IF (K.LT.1) GO TO 80
XRD=-ZQD
ZQD=XQD
XQD=XRD
80 COORD(1,I)=XQD+COORD(1,MC)
COORD(2,I)=YQD+COORD(2,MC)
COORD(3,I)=ZQD+COORD(3,MC)
90 CONTINUE
C
C *** NOW REMOVE THE TRANSLATION VECTORS, IF ANY, FROM THE ARRAY COOR
C
100 CONTINUE
K=NATOMS
110 IF(LABELS(K).NE.107) GOTO 120
K=K-1
GOTO 110
120 K=K+1
IF(K.GT.NATOMS) GOTO 170
C
C SYSTEM IS A SOLID, OF DIMENSION NATOMS+1-K
C
L=0
DO 130 I=K,NATOMS
L=L+1
MC=NA(I)
TVEC(1,L)=COORD(1,I)-COORD(1,MC)
TVEC(2,L)=COORD(2,I)-COORD(2,MC)
TVEC(3,L)=COORD(3,I)-COORD(3,MC)
130 CONTINUE
ID=L
IF (ICALCN.NE.NUMCAL) THEN
ICALCN=NUMCAL
WRITE(6,140)NDIMEN(ID+1)
140 FORMAT(/10X,' THE SYSTEM IS A ',A15,/)
IF(ID.EQ.0) GOTO 170
WRITE(6,150)
WRITE(6,160)(I,(TVEC(J,I),J=1,3),I=1,ID)
150 FORMAT(/,' UNIT CELL TRANSLATION VECTORS',/
1/,' X Y Z')
160 FORMAT(' T',I1,' = ',F11.7,' ',F11.7,' ',F11.7)
ENDIF
170 CONTINUE
J=0
DO 190 I=1,NATOMS
IF (LABELS(I).EQ.99.OR.LABELS(I).EQ.107) GO TO 190
J=J+1
C$DOIT ASIS
DO 180 K=1,3
180 COORD(K,J)=COORD(K,I)
190 CONTINUE
RETURN
END