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meteor strain parameters #66

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fthirion89 opened this issue Nov 27, 2024 · 0 comments

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fthirion89 commented Nov 27, 2024

In variantcalling.py:
"--min-alternate-count",
str(1),
"--min-coverage",
str(min_snp_depth),

min-coverage should be -p (and not -s).
-s should be either removed or replace min-alternate-count with 1 as default parameter

fthirion89 assigned aghozlane

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