diff --git a/meteor/tests/test_variantcalling.py b/meteor/tests/test_variantcalling.py index 05dc3d4..3e23eab 100644 --- a/meteor/tests/test_variantcalling.py +++ b/meteor/tests/test_variantcalling.py @@ -101,8 +101,7 @@ def test_create_consensus( ) -> None: vc_builder.matrix_file = datadir / "eva71_bench" / "eva71_bench.tsv.xz" reference_file = datadir / "eva71" / "fasta" / "eva71.fasta.gz" - # consensus_file = tmp_path / "consensus.fasta.xz" - consensus_file = Path("/pasteur/appa/homes/aghozlan/consensus2.fasta.xz") + consensus_file = tmp_path / "consensus.fasta.xz" bed_file = datadir / "eva71" / "database" / "eva71.bed" vcf_file = datadir / "eva71_bench" / "eva71_bench.vcf.gz" low_cov_sites = pd.read_table(