README

# cfastq3

cfastq3 combined I1, R1 and R2 files into a single Fastq file with new tags to be used downstream.  Chunking into multiple files is possible for downstream multiprocessing.

| Tools | URL |
| ------ | ------ |
| alntools | https://churchill-lab.github.io/alntools/ |


### Compiling

Simple type 'make' in the directory.


### Development

Contact [Kwangbom "KB" Choi, Ph.D.](https://www.jax.org/research-and-faculty/faculty/research-scientists/kb-choi)