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UnicodeDecode error parsing successful VASP job #218
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I edited line 172, modifying RunVaspCustodian class |
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System
Summary
I launch vasp calculation with help of fireworks in offline mode on our group cluster. (Nodes cannot make network connections so online node is not an option). When fireworks tries to retrieve status of completed job (after lpad recover_offline), it fails because custodian cannot decode something:
Error message
Traceback (most recent call last):
File "/public/home/evgenii/.virtualenvs/science/lib/python3.7/site-packages/fireworks/core/rocket.py", line 261, in run
m_action = t.run_task(my_spec)
File "/public/home/evgenii/.virtualenvs/science/lib/python3.7/site-packages/atomate/vasp/firetasks/run_calc.py", line 300, in run_task
stored_custodian_data = {"custodian": json.load(f)}
File "/public/home/evgenii/miniconda3/lib/python3.7/json/init.py", line 293, in load
return loads(fp.read(),
File "/public/home/evgenii/miniconda3/lib/python3.7/codecs.py", line 322, in decode
(result, consumed) = self._buffer_decode(data, self.errors, final)
UnicodeDecodeError: 'utf-8' codec can't decode byte 0x8b in position 1: invalid start byte
Files
custodian_error.tar.gz
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