_site.yml

name: "gannet"
navbar:
  title: "Gannet"
  left:
    - text: "Home"
      icon: fa-home
      href: index.html
    - text: "Documentation"
      menu:
        - text: "Getting started"
          href: getting-started.html
        - text: "Reference"
          href: reference.html
        - text: "Output structure attributes"
          href: output-structure-attributes.html
        - text: "Preprocessing"
          href: preprocessing.html
        - text: "Signal modeling"
          href: signal-modeling.html
        - text: "Data quality metrics"
          href: data-quality-metrics.html
        - text: "Quantification & tissue correction"
          href: quantification-tissue-correction.html
        - text: "Additional tools"
          href: additional-tools.html
    - text: "Examples"
      menu:
        - text: "GannetPreInitialise settings"
          href: gannetpreinitialise-settings.html
        - text: "Batch processing script"
          href: batch-script.html
        - text: "Joining data files"
          href: joining-data-files.html
    - text: "FAQ"
      href: faq.html
    - text: "Release notes"
      href: release-notes.html
    - text: "Forum"
      href: https://forum.mrshub.org/c/mrs-software/gannet/9
  right:
    - text: "Report an issue"
      href: https://github.com/markmikkelsen/Gannet/issues
    - icon: fa-github fa-lg
      href: https://github.com/markmikkelsen/Gannet
    - icon: fa-envelope fa-lg
      href: mailto:mam4041@med.cornell.edu?subject=[Gannet]%20<Please enter the subject of your query here>
output:
  html_document:
    anchor_sections: TRUE
    theme: lumen
    highlight: tango
    includes:
      in_header: header.html
      after_body: footer.html
    css: styles.css
    code_download: TRUE