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meet-014_2024-10-30.md

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Meeting agenda, notes and actions for 2024-10-30 at 12 noon ET

Organizer : Daniel Wheeler

Attendees : - Daniel Wheeler (he/him)

  • Olga Wodo
  • Hafiz Noman
  • Marvin Tegeler
  • Katsuyo Thornton
  • Zachary Trautt (he/him)
  • Trevor Keller

Links

Agenda

  1. Please add your name above
  2. Any questions or items to raise for discussion (please add)
  3. Hafiz presentation
  4. Reminders
    • Next WG meet
      • 2024-11-27, Wednesday, 12-noon ET
  5. ro-crate-cli tool
    • Building limited CLI tool to generate RO-Crates from a YAML file
    • See https://github.com/marda-alliance/phase-field-schema/tree/main/ro-crate-examples
    • Two examples: simple and fipy
    • Things to do
      • CI / Testing / Linting
      • Some documentation
      • PRISMS-PF example
      • OpenPhase?
      • Hafiz suggestion?
      • Integrate with other PF code?
      • make separate config file for author related content
      • Upload to Zenodo
      • Upload to WorkflowHub
      • Improve specification section
      • Infer more software related data from repository

Notes

  • Add this to the repositorty?
  • What does the context look like?
  • Are there any slides?
  • Where is ontoms defined?
  • Could ontoms:solver be a SoftwareApplication in workflow run ro-crate?
  • employsTool has equivalent in workflow run ro-crate
  • Could we translate to workflow run ro-crate?
  • TaskObjective is from ontoms?
  • Hafiz use case using RO-Crate
    • 2 polymers + solvent phase field model
    • microstructure evolution
    • adding in a second ontology ontoms
    • use workflow run-rocrate rather than ro-crate?
  • How was the file created (Marvin)
    • Created by hand and formatted with Black (Hafiz)
  • Marvin has ideas to create openphase example
    • Meet with Marvin to work on openphase example
  • Email David about prisms-pf example
  • Where to publish?

Actions Items

  • Keep working on RO-Crate CLI tool to generate Workflow Run RO-Crates for Phase Field
  • Follow up with Marvin to integrate OpenPhase example
  • Follow up with David to integrate PRISMS-PF example
  • Hafiz to integrate example when ready