From a0ca25aaec52fd9092bc1a2dc720f948826b3415 Mon Sep 17 00:00:00 2001
From: Marcel Zwiers <m.zwiers@donders.ru.nl>
Date: Tue, 16 Apr 2024 15:22:43 +0200
Subject: [PATCH] Fix false positive matches from other parts in the BIDS
 filename (e.g. files named `sub-01-acq-fieldmap_magnitude1.nii.gz` (see
 github issue #264)

---
 sdcflows/fieldmaps.py | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/sdcflows/fieldmaps.py b/sdcflows/fieldmaps.py
index b724a26a8b..0909592ee8 100644
--- a/sdcflows/fieldmaps.py
+++ b/sdcflows/fieldmaps.py
@@ -340,9 +340,9 @@ def __attrs_post_init__(self):
                 try:
                     new_path = (
                         sources[0].parent / sources[0].name
-                        .replace("fieldmap", "magnitude")
-                        .replace("diff", "1")
-                        .replace("phase", "magnitude")
+                        .replace("_fieldmap", "_magnitude")
+                        .replace("_phasediff", "_phase1")
+                        .replace("_phase", "_magnitude")
                     )
                     self.sources.append(FieldmapFile(new_path))
                 except Exception: