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Traceback (most recent call last):
File "/usr/lib/python3.6/http/client.py", line 564, in _get_chunk_left
chunk_left = self._read_next_chunk_size()
File "/usr/lib/python3.6/http/client.py", line 531, in _read_next_chunk_size
return int(line, 16)
ValueError: invalid literal for int() with base 16: b''
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/lib/python3.6/http/client.py", line 596, in _readinto_chunked
chunk_left = self._get_chunk_left()
File "/usr/lib/python3.6/http/client.py", line 566, in _get_chunk_left
raise IncompleteRead(b'')
http.client.IncompleteRead: IncompleteRead(0 bytes read)
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/opt/MitoHiFi/src/findMitoReference.py", line 93, in <module>
for g in [args.species] + list(get_lineage(args.species)):
File "/opt/MitoHiFi/src/findMitoReference.py", line 35, in get_lineage
records = Entrez.read(handle)
File "/usr/local/lib/python3.6/dist-packages/Bio/Entrez/__init__.py", line 508, in read
record = handler.read(handle)
File "/usr/local/lib/python3.6/dist-packages/Bio/Entrez/Parser.py", line 335, in read
self.parser.ParseFile(handle)
File "/usr/lib/python3.6/http/client.py", line 467, in read
n = self.readinto(b)
File "/usr/lib/python3.6/http/client.py", line 501, in readinto
return self._readinto_chunked(b)
File "/usr/lib/python3.6/http/client.py", line 612, in _readinto_chunked
raise IncompleteRead(bytes(b[0:total_bytes]))
http.client.IncompleteRead: IncompleteRead(1725 bytes read)
container: ghcr.io/marcelauliano/mitohifi:master (It would be really nice if this was versioned)
The text was updated successfully, but these errors were encountered:
Dear Mahesh, nothing has been changed in findMitoReference.py it the latests releases. If something is changed, it will be written in the version release.
Command executed:
Error trace:
container:
ghcr.io/marcelauliano/mitohifi:master
(It would be really nice if this was versioned)The text was updated successfully, but these errors were encountered: