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iNaturalist Competition Training Code

This code finetunes an Inception V3 model on the iNaturalist 2017 competition dataset. You can read about the results in this blog post.

Training

The network was trained on Ubuntu 16.04 using PyTorch 0.1.12. Each training epoch took about two hours using a GTX 1080. The links for the raw data are available here. We also provide a pretrained model that can be downloaded from here. Every epoch the code will save a checkpoint and also save the current best model according to validation accuracy.

Results

Training for about 70 epochs (note the model pretty much converges after 30 epochs) results in a top one accuracy of 64.44% and and top five of 85.34% on the validation set. Below are the results broken down by super category.

Super Category Num Classes Val Top 5 Acc (%)
Plantae 2,101 85.96
Insecta 1,021 89.66
Aves 964 85.40
Reptilia 289 74.56
Mammalia 186 79.48
Fungi 121 89.44
Amphibia 115 75.09
Mollusca 93 83.00
Animalia 77 85.39
Arachnida 56 88.95
Actinopterygii 53 79.90
Chromista 9 81.94
Protozoa 4 91.78

Submission File

By setting the following flags it's possible to generate a submission file for the competition.

    evaluate = True
    save_preds = True
    resume = 'model_path/iNat_2017_InceptionV3.pth.tar'  # path to trained model
    val_file = 'ann_path/test2017_3_public_use.json'     # path to test file
    rootdir = 'test_ims_path/ignat_test_images_2017/'    # path to test images
    op_file_name = 'inat2017_test_preds.csv'             # submission filename