diff --git a/CHANGELOG b/CHANGELOG index 0da9412d2..d9451aa74 100644 --- a/CHANGELOG +++ b/CHANGELOG @@ -1,3 +1,29 @@ +v. 3.5.1 + - Add the stress tensor calculation on GPUs for DNA + - Improve the performance and memory consumption of the DNA and RNA interactions + - Improve the numerical stability of the CUDA RNA and DNA codes + - Make the StressAutocorrelation observable output also the bulk and longitudinal ACFs + - Remove some unnecessary checks on the required keys from the MC backend + - Add a pivot move to the MC2 backend + - Add the possibility of disabling JSON support at compile time (-DJSON_ENABLED=Off) + - Fix a bug whereby a DNA force was sometimes incorrectly evaluated on GPU + - Fix two minor bugs in the CUDARNA interaction [0112a3e] + - Fix a bug whereby the code would sometimes segfault due to plugins [b6ed721] + oxpy: + - Make the metad interface set more default input options + oat: + - Completely rewrote oxDNA/ANM -> PDB converter + - Now works with RNA as well as DNA and proteins + - No longer depends on Biopython (removed from oat dependencies). + - More control over output files. + - All oat utilities that don't involve oxpy have compete and correct type annotations + - Many doctoring updates. + - Better error messages when something that isn't a configuration file is passed to the configuration parser. + - Update the dot-bracket parser to accept pseudoknotted structures + - bugfixes: + - Decimal in particle IDs no longer break forces2pairs. + - Extra spaces in the header of the topology parser no longer crash it. + v. 3.5.0 [a16d07b] - Strip down the exprtk library to speed up compilation - Fix a bug whereby setting lastconf_file to /dev/null would segfault