DESCRIPTION

Package: bactaxR
Type: Package
Title: Bacterial taxonomy construction and evaluation in R
Version: 0.2.3
Author: Laura M. Carroll
Maintainer: Laura M. Carroll <laura.carroll@umu.se>
Description: Functions for plotting and interpreting ANI values, constructing dendrograms using pairwise ANI values, identifying medoid genomes at selected genomospecies thresholds, and mapping discrete traits to phylogenies.
License: GNU General Public License v3.0
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.2
Depends: R (>= 3.6.0), ape, base, cluster, dendextend, dplyr, ggplot2, ggtree, graphics, grDevices, igraph, maps, methods, phylobase, phytools, readxl, reshape2, stats, utils, viridis, viridisLite
Imports: ape, base, cluster, dendextend, dplyr, ggplot2, ggtree, graphics, grDevices, igraph, maps, methods, phylobase, phytools, readxl, reshape2, stats, utils, viridis, viridisLite