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align.yml
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# This workflow will review a GloBI indexed dataset.
# For more information see: https://globalbioticinteractions.org
name: Name Alignment by Nomer
on:
push:
branches: [ '*' ]
pull_request:
branches: [ '*' ]
schedule:
- cron: "0 0 * * 1"
jobs:
align:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- name: Set up JDK 1.8
uses: actions/setup-java@v3
with:
distribution: 'temurin'
java-version: '8'
- name: Download alignment script
run: curl --silent -L "https://raw.githubusercontent.com/globalbioticinteractions/globinizer/master/align-names.sh" > align-names.sh
- name: Align names
run: bash align-names.sh "${GITHUB_REPOSITORY}"
- name: Share alignment report
uses: actions/upload-artifact@v3
with:
name: alignment-report
path: |
names-aligned.csv
names-aligned.tsv
names-aligned.txt
data/