Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Manuscript figures outline #4

Open
liu-genomics opened this issue Dec 8, 2018 · 3 comments
Open

Manuscript figures outline #4

liu-genomics opened this issue Dec 8, 2018 · 3 comments

Comments

@liu-genomics
Copy link
Owner

Figure 1.

1.1 Method outline (Cartoon representation of the methodology)

Figure 2.

2.1 Spatial distribution
image
2.2 specificity
image
2.3 Linearity
image
2.4 Genome Browser view
2.5 Replication consistency

Figure 3 Comparison with other methods

3.1 Compare with other Tab-seq
image
3.2 Enrichment
image
3.3 Sensitivity
image

Figure 4. Comparison with other genomic features

4.1 Genomic distribution piechart
image
4.2 Enrichment in genomic features
image
image

Figure 5. PN analysis

Enrichment of 5hmc in genes up-regulated in 2-cell stage compared to MII

@shuxiaxiaolu
Copy link

Comparison with 5hmCDIP, TAB-seq and hmC-seal, make the pearson correlation figure

@shuxiaxiaolu
Copy link

image

@shuxiaxiaolu
Copy link

IGV figure to show that Jumps-seq could recover more information than hmC-seal.Similar as Xiaolong's figures.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants