test-pr.yaml

name: "Pull request: deploy to preview website (Netlify) and test notebooks"

on:
  pull_request:
    branches:
      - main
      - master

jobs:
  pages:
    name: "Preview on Netlify"
    runs-on: ubuntu-latest
    container: linogaliana/python-datascientist:latest
    steps:
      - uses: actions/checkout@v3
        with:
          fetch-depth: 0
          ref: ${{ github.event.pull_request.head.ref }}
          repository: ${{github.event.pull_request.head.repo.full_name}}
      - name: Configure safe.directory  # Workaround for actions/checkout#760
        run: git config --global --add safe.directory /__w/python-datascientist/python-datascientist
      - name: Render website
        run: |
          quarto --version
          quarto render --to html --profile fr
          quarto render --to html --profile en
      - name: Install npm
        if: ${{ github.event.pull_request.head.repo.full_name == github.repository }}
        uses: actions/setup-node@v4      
        with:
          node-version: '18'        
      - name: Deploy to Netlify
        if: ${{ github.event.pull_request.head.repo.full_name == github.repository }}
        # NETLIFY_AUTH_TOKEN and NETLIFY_SITE_ID added in the repo's secrets
        env:
          NETLIFY_AUTH_TOKEN: ${{ secrets.NETLIFY_AUTH_TOKEN }}
          NETLIFY_SITE_ID: ${{ secrets.NETLIFY_SITE_ID }}
          BRANCHE_REF: ${{ github.event.pull_request.head.ref }}
        run: |
          npm init -y
          npm install --unsafe-perm=true netlify-cli -g
          netlify init
          netlify deploy --alias=${BRANCHE_REF} --dir="_site" --message "Preview deploy from ${BRANCHE_REF}"
  enonces:
    name: Render notebooks
    runs-on: ubuntu-latest
    container: linogaliana/python-datascientist:latest
    steps:
      - uses: actions/checkout@v3
        with:
          fetch-depth: 0
          ref: ${{ github.event.pull_request.head.ref }}
          repository: ${{github.event.pull_request.head.repo.full_name}}
      - name: Configure safe.directory  # Workaround for actions/checkout#760
        run: |
          git config --global --add safe.directory /__w/python-datascientist/python-datascientist
          git config --global --add safe.directory /__w/python-datascientist/python-datascientist-notebooks
      - shell: bash
        run: |
          ls
          conda info
          conda list
      - name: Convert in ipynb with Quarto
        run: |
          quarto --version
          quarto render content --to ipynb --profile fr
          quarto render content --to ipynb --profile en
          mkdir -p temp_notebooks
          mkdir -p temp_notebooks/notebooks
          python build/move_files.py --direction temp_notebooks/notebooks
          quarto render content --to ipynb --execute -M echo:true --profile fr
          quarto render content --to ipynb --execute -M echo:true --profile en
          mkdir -p temp_notebooks/corrections
          python build/move_files.py --direction temp_notebooks/corrections
      - name: Pushes to another repository
        if: ${{ github.event.pull_request.head.repo.full_name == github.repository }}
        uses: linogaliana/github-action-push-to-another-repository@main
        env:
          API_TOKEN_GITHUB: ${{ secrets.API_TOKEN_GITHUB }}
        with:
          source-directory: 'temp_notebooks/'
          destination-repository-username: 'linogaliana'
          destination-repository-name: 'python-datascientist-notebooks'
          user-email: lino.galiana@insee.fr
          destination-github-username: linogaliana
          target-branch: dev
          create-target-branch-if-needed: true
          reset-repo: true
  define-matrix:
    runs-on: ubuntu-latest
    needs: enonces
    outputs:
      matrix: ${{ steps.set-matrix.outputs.matrix }}
    steps:
      - uses: actions/checkout@v4
        with:
          repository: 'linogaliana/python-datascientist-notebooks'
          ref: dev
      - name: Define matrix
        id: set-matrix
        run: |
          echo "::set-output name=matrix::$(find . -type f -name "*.ipynb" ! -name "_*" | jq -R -s -c 'split("\n")[:-1]')"
  check:
    needs: define-matrix
    runs-on: ubuntu-latest
    container: linogaliana/python-datascientist:latest
    continue-on-error: true
    strategy:
        matrix:
            manifest: ${{ fromJson(needs.define-matrix.outputs.matrix) }}
    steps:
      - uses: actions/checkout@v4   
        with:
          repository: 'linogaliana/python-datascientist-notebooks'
      - run: |
          quarto render ${{ matrix.manifest }} --execute