From bc6c527559228dc7f6d94123eb49cf5c5ee4a8be Mon Sep 17 00:00:00 2001 From: Rayan Chikhi Date: Fri, 3 Apr 2020 11:21:42 +0200 Subject: [PATCH] Update README.md main example had a typo (`pb-reads.fq` should be `reads.fq`)... was it intentional to see if user pays attention? :) --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index 18cda25..ed40cc1 100644 --- a/README.md +++ b/README.md @@ -8,7 +8,7 @@ ln -s selfSampleData/pacbio_filtered.fastq reads.fq git clone https://github.com/lh3/minimap2 && (cd minimap2 && make) git clone https://github.com/lh3/miniasm && (cd miniasm && make) # Overlap for PacBio reads (or use "-x ava-ont" for nanopore read overlapping) -minimap2/minimap2 -x ava-pb -t8 pb-reads.fq pb-reads.fq | gzip -1 > reads.paf.gz +minimap2/minimap2 -x ava-pb -t8 reads.fq reads.fq | gzip -1 > reads.paf.gz # Layout miniasm/miniasm -f reads.fq reads.paf.gz > reads.gfa ```