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logmvnpdf.m
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logmvnpdf.m
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function [logp] = logmvnpdf(x,mu,Sigma)
% outputs log likelihood array for observations x where x_n ~ N(mu,Sigma)
% x is NxD, mu is 1xD, Sigma is DxD
% obtained from:
% http://uk.mathworks.com/matlabcentral/fileexchange/34064-log-multivariate-normal-distribution-function
[N,D] = size(x);
const = -0.5 * D * log(2*pi);
xc = bsxfun(@minus,x,mu);
term1 = -0.5 * sum((xc / Sigma) .* xc, 2); % N x 1
term2 = const - 0.5 * logdet(Sigma); % scalar
logp = term1' + term2;
end
function y = logdet(A)
U = chol(A);
y = 2*sum(log(diag(U)));
end
% Copyright (c) 2011, Benjamin Dichter
% All rights reserved.
%
% Redistribution and use in source and binary forms, with or without
% modification, are permitted provided that the following conditions are
% met:
%
% * Redistributions of source code must retain the above copyright
% notice, this list of conditions and the following disclaimer.
% * Redistributions in binary form must reproduce the above copyright
% notice, this list of conditions and the following disclaimer in
% the documentation and/or other materials provided with the distribution
%
% THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
% AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
% IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
% ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE
% LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
% CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
% SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
% INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
% CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
% ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
% POSSIBILITY OF SUCH DAMAGE.