Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Use libRoadRunner saveState #288

Open
emitra17 opened this issue Aug 15, 2019 · 0 comments
Open

Use libRoadRunner saveState #288

emitra17 opened this issue Aug 15, 2019 · 0 comments
Labels
enhancement New feature or request

Comments

@emitra17
Copy link
Collaborator

A libroadrunner feature is under development (see sys-bio/roadrunner#550) that allows saving and reloading a libroadrunner object. This would let us avoid the slow XML load that currently occurs for every simulation. I've tested a pre-release libroadrunner with this feature, and it is working well.

When this feature is released, PyBNF should use this workflow to gain a significant speedup in SBML fitting.
@emitra17 emitra17 added the enhancement New feature or request label Aug 15, 2019
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
enhancement New feature or request
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@emitra17