You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Any chance you could provide the complete log?
It's nearly impossible to identify the location of the problem without the full trace (which should be in the log file where this error is written) with something as generic as this kind of error.
This is definitely a bug, and I think it's related to having exactly the number of genomes that you have in your run here (501?).
In the meantime, until we resolve this, I believe that increasing the chunk_size in the "partition" step might fix this error.
Hi !
I get this error and I can't debug why it happens, the input files look good to me
TypeError: Population must be a sequence. For dicts or sets, use sorted(d).
I'm using ppanggolin like this:
ppanggolin workflow --anno list_genomes.tsv -c 64 -o output --clusters clusters.tsv --infer_singletons --rarefaction
Thanks in advance !
Eric
The text was updated successfully, but these errors were encountered: