From 4a530a37615397e70fe571ae595e1f46c5ffcbc5 Mon Sep 17 00:00:00 2001 From: JeanMainguy Date: Wed, 8 Nov 2023 17:26:37 +0100 Subject: [PATCH] add metadata separator in gff write fct --- ppanggolin/projection/projection.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/ppanggolin/projection/projection.py b/ppanggolin/projection/projection.py index c05a8a8d..fb54accb 100644 --- a/ppanggolin/projection/projection.py +++ b/ppanggolin/projection/projection.py @@ -275,7 +275,7 @@ def launch(args: argparse.Namespace): contig_to_rgp[rgp.contig].append(rgp) write_gff_file(organism, contig_to_rgp, rgp_to_spot_id, outdir=org_outdir, compress=False, - annotation_sources=annotation_sources, genome_sequences=genome_sequences) + annotation_sources=annotation_sources, genome_sequences=genome_sequences, metadata_sep="|") write_summaries(organism_2_summary, output_dir)