diff --git a/ppanggolin/projection/projection.py b/ppanggolin/projection/projection.py index c05a8a8d..fb54accb 100644 --- a/ppanggolin/projection/projection.py +++ b/ppanggolin/projection/projection.py @@ -275,7 +275,7 @@ def launch(args: argparse.Namespace): contig_to_rgp[rgp.contig].append(rgp) write_gff_file(organism, contig_to_rgp, rgp_to_spot_id, outdir=org_outdir, compress=False, - annotation_sources=annotation_sources, genome_sequences=genome_sequences) + annotation_sources=annotation_sources, genome_sequences=genome_sequences, metadata_sep="|") write_summaries(organism_2_summary, output_dir)