From 14f935704faf3f463eee43d53bf1d89cb669786a Mon Sep 17 00:00:00 2001
From: Adelme Bazin <adelme.bazin@gmail.com>
Date: Wed, 20 Sep 2023 20:19:44 +0200
Subject: [PATCH] add logging if genes share start position

---
 ppanggolin/genome.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/ppanggolin/genome.py b/ppanggolin/genome.py
index 6552348e..9f3e0498 100644
--- a/ppanggolin/genome.py
+++ b/ppanggolin/genome.py
@@ -331,7 +331,7 @@ def __setitem__(self, start: int, gene: Gene):
         if not isinstance(gene, Gene):
             raise TypeError(f"'Gene' type was expected but you provided a '{type(gene)}' type object")
         if start in self._genes_getter:
-            raise ValueError(f"Gene with start position {start} already exists in the contig")
+            raise ValueError(f"Gene '{self._genes_getter[start].ID}' with start position {start} already exists in the contig '{self.name}', cannot add gene '{gene.ID}'")
         if gene.position is None:
             raise AttributeError("The gene object needs to have its position in the contig filled before adding it")
         # Adding empty values.