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I am wondering for the metagenomic case, whether the coverage of the target genome affected the final c estimate. I can see that the simulation use 5X coverage for the genome. In many real world cases, coverage varies by quite a lot sample by sample. Is there a rule to say what coverage threshold is the best, e.g., >5X?
Thanks for the great tool.
Jianshu
The text was updated successfully, but these errors were encountered:
Hello mcorr team,
I am wondering for the metagenomic case, whether the coverage of the target genome affected the final c estimate. I can see that the simulation use 5X coverage for the genome. In many real world cases, coverage varies by quite a lot sample by sample. Is there a rule to say what coverage threshold is the best, e.g., >5X?
Thanks for the great tool.
Jianshu
The text was updated successfully, but these errors were encountered: