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IOException when running Ilastik Headless #19
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Hi, I also get this exception when running the Ilastik Headless (Pixel classification) node with more than a few hundred images (just 2D single channel in my case though and not within a parallel chunk loop). Thanks @imagejan for the workaround! |
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I got the following exception when running the Ilastik Headless (Pixel classification) node inside a parallel chunk loop with a few thousand 2D multi-channel images (x=1020, y=1024, c=3):
It was running fine before with a smaller dataset, but failed when trying to scale it up.
Looking at this code, I think this might be solved by chunking
List<String> inFiles
if it gets too big, and running several processes.I try to work around this now by chunking in smaller pieces within KNIME.
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